RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 WNK3Q9BYP7 1800 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 LIG1P18858 919 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 HOXC9P31274 260 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 EPS8L3Q8TE67 593 aaKnown RBP7.97□□□□□ -1.13
ATM-229ENST00000639953 ANKRD24Q8TF21 1146 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 IP6K1Q92551 441 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 C1GALT1Q9NS00 363 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 THSD7AQ9UPZ6 1657 aa7.97□□□□□ -1.13
ATM-229ENST00000639953 CRB1P82279 1406 aa7.96□□□□□ -1.13
ATM-229ENST00000639953 PPM1GO15355 546 aaPredicted RBP7.96□□□□□ -1.14
ATM-229ENST00000639953 GADD45BO75293 160 aaPredicted RBP7.96□□□□□ -1.14
ATM-229ENST00000639953 AMPHP49418 695 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 FAAP100Q0VG06 881 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 MAP7Q14244 749 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 SEZ6L2Q6UXD5 910 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 METTL22Q9BUU2 404 aaPredicted RBP7.96□□□□□ -1.14
ATM-229ENST00000639953 WDR18Q9BV38 432 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 GSX1Q9H4S2 264 aaPredicted RBP7.96□□□□□ -1.14
ATM-229ENST00000639953 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 ZC3H7BQ9UGR2 993 aaKnown RBP7.96□□□□□ -1.14
ATM-229ENST00000639953 NUDCQ9Y266 331 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 RNF114Q9Y508 228 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 ABCC6O95255 1503 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 WDR17Q8IZU2 1322 aa7.96□□□□□ -1.14
ATM-229ENST00000639953 BLMP54132 1417 aaPredicted RBP7.95□□□□□ -1.14
ATM-229ENST00000639953 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.95□□□□□ -1.14
ATM-229ENST00000639953 TMEM238LA0A1B0GVL6 79 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 TXKP42681 527 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 COL19A1Q14993 1142 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 HSP90AB2PQ58FF8 381 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 DUSP27Q5VZP5 1158 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 MORC1Q86VD1 984 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 CCDC146Q8IYE0 955 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 GLIS3Q8NEA6 775 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
ATM-229ENST00000639953 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 ZFYVE1Q9HBF4 777 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 POLKQ9UBT6 870 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 ANGEL1Q9UNK9 670 aaKnown RBP7.95□□□□□ -1.14
ATM-229ENST00000639953 DAGLAQ9Y4D2 1042 aa7.95□□□□□ -1.14
ATM-229ENST00000639953 PRNPP04156 253 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 GRM2Q14416 872 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 CPSF6Q16630 551 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATM-229ENST00000639953 USHBP1Q8N6Y0 703 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 RETREG2Q8NC44 543 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 CSRNP1Q96S65 589 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 KRTAP9-9Q9BYP9 154 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 KRTAP9-4Q9BYQ2 154 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 DNAJC25Q9H1X3 360 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 CCDC86Q9H6F5 360 aaKnown RBP7.94□□□□□ -1.14
ATM-229ENST00000639953 NLRP2Q9NX02 1062 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 PARP4Q9UKK3 1724 aaKnown RBP7.94□□□□□ -1.14
ATM-229ENST00000639953 NSD2O96028 1365 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 NPC1L1Q9UHC9 1359 aa7.94□□□□□ -1.14
ATM-229ENST00000639953 LRRC37A3O60309 1634 aa7.93□□□□□ -1.14
ATM-229ENST00000639953 FAM208AQ9UK61 1670 aaKnown RBP7.93□□□□□ -1.14
ATM-229ENST00000639953 PTPN12Q05209 780 aaKnown RBP7.93□□□□□ -1.14
ATM-229ENST00000639953 HP1BP3Q5SSJ5 553 aaPredicted RBP7.93□□□□□ -1.14
ATM-229ENST00000639953 PI16Q6UXB8 463 aa7.93□□□□□ -1.14
ATM-229ENST00000639953 KRT27Q7Z3Y8 459 aa7.93□□□□□ -1.14
ATM-229ENST00000639953 TP53INP2Q8IXH6 220 aa7.93□□□□□ -1.14
ATM-229ENST00000639953 BSDC1Q9NW68 430 aaPredicted RBP7.93□□□□□ -1.14
ATM-229ENST00000639953 THRAP3Q9Y2W1 955 aaKnown RBP7.93□□□□□ -1.14
ATM-229ENST00000639953 RTL1A6NKG5 1358 aa7.93□□□□□ -1.14
ATM-229ENST00000639953 FLT4P35916 1363 aa7.93□□□□□ -1.14
ATM-229ENST00000639953 ZNF862O60290 1169 aa7.92□□□□□ -1.14
ATM-229ENST00000639953 NBPF6Q5VWK0 638 aa7.92□□□□□ -1.14
ATM-229ENST00000639953 PRPF40BQ6NWY9 871 aaKnown RBP7.92□□□□□ -1.14
ATM-229ENST00000639953 NBPF4Q96M43 638 aa7.92□□□□□ -1.14
ATM-229ENST00000639953 ZNF521Q96K83 1311 aa7.92□□□□□ -1.14
ATM-229ENST00000639953 INSRP06213 1382 aa7.92□□□□□ -1.14
ATM-229ENST00000639953 TMPRSS2O15393 492 aa7.91□□□□□ -1.14
ATM-229ENST00000639953 FCGRTP55899 365 aa7.91□□□□□ -1.14
ATM-229ENST00000639953 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
ATM-229ENST00000639953 OGFOD3Q6PK18 319 aa7.91□□□□□ -1.14
ATM-229ENST00000639953 DISP2A7MBM2 1401 aa7.91□□□□□ -1.14
ATM-229ENST00000639953 PLIN1O60240 522 aa7.9□□□□□ -1.14
ATM-229ENST00000639953 EIF4A2Q14240 407 aaKnown RBP7.9□□□□□ -1.14
ATM-229ENST00000639953 RPS26P11Q5JNZ5 115 aaPredicted RBP7.9□□□□□ -1.14
ATM-229ENST00000639953 VSIG10LQ86VR7 867 aa7.9□□□□□ -1.14
ATM-229ENST00000639953 FBXL18Q96ME1 805 aa7.9□□□□□ -1.14
ATM-229ENST00000639953 RBCK1Q9BYM8 510 aa7.9□□□□□ -1.14
ATM-229ENST00000639953 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.14
ATM-229ENST00000639953 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 MEGF6O75095 1541 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 KIF24Q5T7B8 1368 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 APAF1O14727 1248 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 IL2RBP14784 551 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 MTHFSP49914 203 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 CYP27A1Q02318 531 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 DDB1Q16531 1140 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 C20orf194Q5TEA3 1177 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 DTHD1Q6ZMT9 781 aa7.89□□□□□ -1.15
ATM-229ENST00000639953 CBLL1Q75N03 491 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms