RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TBC1D8BQ0IIM8 1120 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 USP4Q13107 963 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 RINLQ6ZS11 566 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF589Q86UQ0 364 aaPredicted RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 NSUN7Q8NE18 718 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 TCP11Q8WWU5 503 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 DHX58Q96C10 678 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SPATA31A6Q5VVP1 1343 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MROH5Q6ZUA9 1318 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 B4E1Z4 1266 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MAFGO15525 162 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CEP104O60308 925 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 USO1O60763 962 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MBD4O95243 580 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 KRT2P35908 639 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SLC8A3P57103 927 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MTA1Q13330 715 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 E4F1Q66K89 784 aaPredicted RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 FAM167BQ9BTA0 163 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 RGL1Q9NZL6 768 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 ARHGAP6O43182 974 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 RPS6KA5O75582 802 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PYGLP06737 847 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TUBB2AQ13885 445 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 UBE3CQ15386 1083 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TMEM266Q2M3C6 531 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 BICDL1Q6ZP65 573 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 CPLX4Q7Z7G2 160 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 SDCCAG8Q86SQ7 713 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TUBB2BQ9BVA1 445 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TSGA10Q9BZW7 698 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PPP2R2CQ9Y2T4 447 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 IFT172Q9UG01 1749 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 NPHP4O75161 1426 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 E7EVH7 732 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 LUC7L3O95232 432 aaKnown RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 FGAP02671 866 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 IGKV5-2P06315 115 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 GSTO1P78417 241 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 CCZ1BP86790 482 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 CCZ1P86791 482 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 ICA1Q05084 483 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 RESTQ13127 1097 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 HIBCHQ6NVY1 386 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 DDX27Q96GQ7 796 aaKnown RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 SUGCTQ9HAC7 445 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PAPOLBQ9NRJ5 636 aaKnown RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 POLR3EQ9NVU0 708 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 ITSN1Q15811 1721 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 H7C1W4 665 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PAX3P23760 479 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PAPOLAP51003 745 aaKnown RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 IRAK1P51617 712 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 CCDC92Q53HC0 331 aaPredicted RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TTLL7Q6ZT98 887 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 ARHGAP22Q7Z5H3 698 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 DIS3L2Q8IYB7 885 aaKnown RBP6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TSG101Q99816 390 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 HOMER3Q9NSC5 361 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 KAT6BQ8WYB5 2073 aa6.31□□□□□ -1.4
SCARB2-218ENST00000639715 EME2A4GXA9 379 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 AFMP43652 599 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 HSP90AA4PQ58FG1 418 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 CNGA4Q8IV77 575 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 DNAJC10Q8IXB1 793 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 PROCA1Q8NCQ7 364 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 EZH1Q92800 747 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 CALML4Q96GE6 196 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 NIP7Q9Y221 180 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 CEMIPQ8WUJ3 1361 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 ZMYM6O95789 1325 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 PRAMEF22A3QJZ6 481 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 PSMA7O14818 248 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 MAATS1Q7Z4T9 603 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 HELBQ8NG08 1087 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 VCXQ9H320 206 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 PPANQ9NQ55 473 aaKnown RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 AATFQ9NY61 560 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF532Q9HCE3 1301 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 STAT6P42226 847 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 MATR3P43243 847 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 TOB2Q14106 344 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 C11orf91Q3C1V1 193 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 MAP7D1Q3KQU3 841 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 AKNAD1Q5T1N1 836 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 SND1Q7KZF4 910 aaKnown RBP eCLIP6.3□□□□□ -1.42e-6■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms