RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 CALM3P0DP25 149 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 ZBTB48P10074 688 aaPredicted RBP6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 VCAM1P19320 739 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 TREML2Q5T2D2 321 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 FAM184AQ8NB25 1140 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 BRI3BPQ8WY22 251 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 WDR18Q9BV38 432 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 TM6SF1Q9BZW5 370 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 KIAA1683Q9H0B3 1180 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 EMILIN3Q9NT22 766 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 CPA4Q9UI42 421 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 MAST2Q6P0Q8 1798 aa6.75□□□□□ -1.33
HNRNPU-220ENST00000639667 ROBO3Q96MS0 1386 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 CCDC196A0A1B0GTZ2 297 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 BTBD19C9JJ37 291 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 USH1GQ495M9 461 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 SLC26A6Q9BXS9 759 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 LY9Q9HBG7 655 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 MYH7P12883 1935 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 TBC1D8O95759 1140 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 GNAQP50148 359 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 STAT2P52630 851 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 GNL2Q13823 731 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 RCSD1Q6JBY9 416 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 NCAPG2Q86XI2 1143 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 TRIM22Q8IYM9 498 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 IGDCC4Q8TDY8 1250 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 SLF1Q9BQI6 1058 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 RTN4Q9NQC3 1192 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 LIMCH1Q9UPQ0 1083 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 SSC5DA1L4H1 1573 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 WDR46O15213 610 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 ALAS1P13196 640 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 SYDE2Q5VT97 1194 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 APOA5Q6Q788 366 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 DCAF4Q8WV16 495 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 LPAR1Q92633 364 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 ATG4CQ96DT6 458 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 PARK7Q99497 189 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 P2RX7Q99572 595 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 TCP11L1Q9NUJ3 509 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 HOXC10Q9NYD6 342 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 PSME4Q14997 1843 aa6.74□□□□□ -1.33
HNRNPU-220ENST00000639667 MYH1P12882 1939 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 RASSF10A6NK89 507 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 ADD1P35611 737 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 INHBEP58166 350 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 COG2Q14746 738 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 KIF22Q14807 665 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 TSGA10IPQ3SY00 556 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 FAM43AQ8N2R8 423 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 STAG2Q8N3U4 1231 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 ANKRD13CQ8N6S4 541 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 FANCBQ8NB91 859 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 RRP36Q96EU6 259 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 ASCC2Q9H1I8 757 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 RAVER2Q9HCJ3 691 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 COL2A1P02458 1487 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 DOCK2Q92608 1830 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 FMNL1O95466 1100 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 FGRP09769 529 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 EXOSC10Q01780 885 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 SSRP1Q08945 709 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 ASPRV1Q53RT3 343 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 GPATCH4Q5T3I0 446 aaKnown RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 HEATR3Q7Z4Q2 680 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 ZSCAN31Q96LW9 406 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 FEM1BQ9UK73 627 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 AGTPBP1Q9UPW5 1226 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 IVNS1ABPQ9Y6Y0 642 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 V9GY48 417 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 UNCXA6NJT0 531 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 PEX10O60683 326 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 DDAH1O94760 285 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 KCNA4P22459 653 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 LIFRP42702 1097 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 NSMFQ6X4W1 530 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 FAM160B2Q86V87 743 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 PROCA1Q8NCQ7 364 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 SMC3Q9UQE7 1217 aa6.73□□□□□ -1.33
HNRNPU-220ENST00000639667 A0A0G2JLL6 359 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PLEKHA8P1O95397 391 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PDHBP11177 359 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 NT5C2P49902 561 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 ZNF543Q08ER8 600 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 TRIM29Q14134 588 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 SEC23AQ15436 765 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 KIAA1755Q5JYT7 1200 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PRRT2Q7Z6L0 340 aaPredicted RBP6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 IFNL1Q8IU54 200 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
HNRNPU-220ENST00000639667 PHKBQ93100 1093 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms