RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 TMEM132BQ14DG7 1078 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 LRIT3Q3SXY7 679 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 KIAA1755Q5JYT7 1200 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 FAM83BQ5T0W9 1011 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 ANO1Q5XXA6 986 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 DEFB123Q8N688 67 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 SLC17A8Q8NDX2 589 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 APPBP2Q92624 585 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
TARDBP-231ENST00000639599 CEP290O15078 2479 aa17.56■□□□□ 0.4
TARDBP-231ENST00000639599 ERC2O15083 957 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 CHGBP05060 677 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 RARBP10826 455 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 STAT3P40763 770 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 RTP1P59025 263 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 GPR153Q6NV75 609 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 ZNF444Q8N0Y2 327 aaPredicted RBP17.55■□□□□ 0.4
TARDBP-231ENST00000639599 TRPV1Q8NER1 839 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 MAML3Q96JK9 1138 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
TARDBP-231ENST00000639599 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
TARDBP-231ENST00000639599 SLC3A2P08195 630 aaKnown RBP17.54■□□□□ 0.4
TARDBP-231ENST00000639599 RIOX2Q8IUF8 465 aa17.54■□□□□ 0.4
TARDBP-231ENST00000639599 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
TARDBP-231ENST00000639599 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
TARDBP-231ENST00000639599 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
TARDBP-231ENST00000639599 FBXO28Q9NVF7 368 aa17.54■□□□□ 0.4
TARDBP-231ENST00000639599 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
TARDBP-231ENST00000639599 VWA5AO00534 786 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 GPAA1O43292 621 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 SBK1Q52WX2 424 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 PRAMEF19Q5SWL8 479 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 RNF180Q86T96 592 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 NRBP1Q9UHY1 535 aa17.53■□□□□ 0.4
TARDBP-231ENST00000639599 SMIM22K7EJ46 135 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 ZBED4O75132 1171 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 PGK2P07205 417 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.4
TARDBP-231ENST00000639599 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 TEX13BQ9BXU2 312 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 XPNPEP3Q9NQH7 507 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
TARDBP-231ENST00000639599 GSG1L2A8MUP6 293 aa17.51■□□□□ 0.39
TARDBP-231ENST00000639599 PDE4BQ07343 736 aa17.51■□□□□ 0.39
TARDBP-231ENST00000639599 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
TARDBP-231ENST00000639599 SLC39A5Q6ZMH5 540 aa17.51■□□□□ 0.39
TARDBP-231ENST00000639599 OSBP2Q969R2 916 aa17.51■□□□□ 0.39
TARDBP-231ENST00000639599 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
TARDBP-231ENST00000639599 DIS3Q9Y2L1 958 aaKnown RBP17.51■□□□□ 0.39
TARDBP-231ENST00000639599 F5H6K3 240 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 AKR1A1P14550 325 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 RASA1P20936 1047 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 ADCYAP1R1P41586 468 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 KLRC3Q07444 240 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
TARDBP-231ENST00000639599 LRRC41Q15345 812 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 CPXCR1Q8N123 301 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
TARDBP-231ENST00000639599 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 KIFC2Q96AC6 838 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
TARDBP-231ENST00000639599 NAPBQ9H115 298 aa17.5■□□□□ 0.39
TARDBP-231ENST00000639599 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 PRDM1O75626 825 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 NDUFB10O96000 172 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 TRIM60Q495X7 471 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 PPP4R3BQ5MIZ7 849 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 Q7L0L9 218 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-231ENST00000639599 ZNF214Q9UL59 606 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-231ENST00000639599 ADAMTS5Q9UNA0 930 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 ROBO3Q96MS0 1386 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 ALPK3Q96L96 1907 aa17.49■□□□□ 0.39
TARDBP-231ENST00000639599 PATL2C9JE40 543 aaKnown RBP17.48■□□□□ 0.39
TARDBP-231ENST00000639599 M0R2C6 588 aa17.48■□□□□ 0.39
TARDBP-231ENST00000639599 TTLL1O95922 423 aa17.48■□□□□ 0.39
TARDBP-231ENST00000639599 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
TARDBP-231ENST00000639599 FBXO40Q9UH90 709 aa17.48■□□□□ 0.39
TARDBP-231ENST00000639599 FEM1BQ9UK73 627 aa17.48■□□□□ 0.39
TARDBP-231ENST00000639599 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
TARDBP-231ENST00000639599 PGK1P00558 417 aa17.47■□□□□ 0.39
TARDBP-231ENST00000639599 IGHA2P01877 340 aa17.47■□□□□ 0.39
TARDBP-231ENST00000639599 ZNF792Q3KQV3 632 aa17.47■□□□□ 0.39
TARDBP-231ENST00000639599 IFNL3Q8IZI9 196 aa17.47■□□□□ 0.39
TARDBP-231ENST00000639599 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
TARDBP-231ENST00000639599 MSL3Q8N5Y2 521 aaKnown RBP17.47■□□□□ 0.39
TARDBP-231ENST00000639599 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.47■□□□□ 0.39
TARDBP-231ENST00000639599 SPC25Q9HBM1 224 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms