RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TSKSQ9UJT2 592 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MYH1P12882 1939 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 ABLIM1O14639 778 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MAP3K7O43318 606 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SULT1B1O43704 296 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PCP11498 1178 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MLH1P40692 756 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 NLRP12P59046 1061 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PROSER3Q2NL68 480 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MTERF2Q49AM1 385 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 BPHLQ86WA6 291 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SLC44A2Q8IWA5 706 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 HVCN1Q96D96 273 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 HERC2P3Q9BVR0 1158 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PARD6BQ9BYG5 372 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 B4DLN1 442 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 LIN7AO14910 233 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NDUFB5O43674 189 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ONECUT3O60422 494 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC166P0CW27 439 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ZKSCAN1P17029 563 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ZBTB16Q05516 673 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 MTHFD1LQ6UB35 978 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 LILRB1Q8NHL6 650 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CLSTN2Q9H4D0 955 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CAPN10Q9HC96 672 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 STIM2Q9P246 746 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 LCMT1Q9UIC8 334 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 GTF2A1LQ9UNN4 478 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TSC22D4Q9Y3Q8 395 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 SPO11Q9Y5K1 396 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 RASA4BC9J798 803 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 KRT14P02533 472 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 PTPRCP08575 1304 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 PEX5P50542 639 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 WDR81Q562E7 1941 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CARMIL1Q5VZK9 1371 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 PPFIBP1Q86W92 1011 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NLGN1Q8N2Q7 840 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ZFAND2BQ8WV99 257 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NDEL1Q9GZM8 345 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 UBN1Q9NPG3 1134 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TBX22Q9Y458 520 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 AFG3L2Q9Y4W6 797 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 GNALP38405 381 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 SCNN1BP51168 640 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 GLMNQ92990 594 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ERO1AQ96HE7 468 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 FRMD6Q96NE9 622 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 SELENOSQ9BQE4 189 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TMCO1Q9UM00 188 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NUDCQ9Y266 331 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 BAZ2BQ9UIF8 2168 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NMT2O60551 498 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ZNF254O75437 659 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 COPAP53621 1224 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 DDR1Q08345 913 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 UNC5DQ6UXZ4 953 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC63Q8NA47 563 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 MDM1Q8TC05 714 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TRIM63Q969Q1 353 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TTC1Q99614 292 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 A6NNZ2 444 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TRPA1O75762 1119 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 MAP3K7CLP57077 242 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 AP1B1Q10567 949 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TUBB8Q3ZCM7 444 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 HYIQ5T013 277 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ARMC4Q5T2S8 1044 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CORO6Q6QEF8 472 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 LRRC31Q6UY01 552 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 SPATA17Q96L03 361 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NAA15Q9BXJ9 866 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ARNT2Q9HBZ2 717 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 DMGDHQ9UI17 866 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TTF2Q9UNY4 1162 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 RPS6KA5O75582 802 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 ITGA7Q13683 1181 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TSGA10IPQ3SY00 556 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 FAM117BQ6P1L5 589 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CENPQQ7L2Z9 268 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TBATAQ96M53 351 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 APOL5Q9BWW9 433 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CARD11Q9BXL7 1154 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 RASAL2Q9UJF2 1139 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 PA2G4Q9UQ80 394 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 PLEKHH1Q9ULM0 1364 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 KLHL41O60662 606 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 TOP1P11387 765 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 RRP1P56182 461 aaKnown RBP4.76□□□□□ -1.65
SCN3A-209ENST00000639244 LMNB2Q03252 620 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 NFIAQ12857 509 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CFAP100Q494V2 611 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 PPP1R14CQ8TAE6 165 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CAGE1Q8TC20 777 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CNGB3Q9NQW8 809 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 DSEQ9UL01 958 aa4.76□□□□□ -1.65
SCN3A-209ENST00000639244 CORO1CQ9ULV4 474 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms