RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 MCM5P33992 734 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 HSPA4P34932 840 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 CCDC96Q2M329 555 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 KIAA1755Q5JYT7 1200 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 IFIT1BQ5T764 474 aaKnown RBP10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 STOX1Q6ZVD7 989 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 CYB5R4Q7L1T6 521 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 CHST3Q7LGC8 479 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 NEK1Q96PY6 1258 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 CWC22Q9HCG8 908 aaKnown RBP10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 MGAMO43451 1857 aa10.78□□□□□ -0.68
CACNA1A-239ENST00000637297 TMEM232C9JQI7 657 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 PRC1O43663 620 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 HMGB1P09429 215 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 PSMA5P28066 241 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 DSG3P32926 999 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 CCNA1P78396 465 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 FGD1P98174 961 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 PLS1Q14651 629 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 WTAPQ15007 396 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 FAM110CQ1W6H9 321 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 TMEM67Q5HYA8 995 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 RCSD1Q6JBY9 416 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 NFXL1Q6ZNB6 911 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 PRPF38AQ8NAV1 312 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 PNMA1Q8ND90 353 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 CHURC1Q8WUH1 139 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 DCAF4Q8WV16 495 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 FEM1BQ9UK73 627 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 COL11A1P12107 1806 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-239ENST00000637297 DOCK3Q8IZD9 2030 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 SPDYE16A6NNV3 312 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 BCRP11274 1271 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 HOXD10P28358 340 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 PSMC4P43686 418 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 NOVP48745 357 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 STAT2P52630 851 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 FCGRTP55899 365 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 LACTBP83111 547 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 KCTD1Q719H9 257 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 FAM160B2Q86V87 743 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 MB21D2Q8IYB1 491 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 RASEFQ8IZ41 740 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 TMTC2Q8N394 836 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 ENAHQ8N8S7 591 aaPredicted RBP10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 NKX2-3Q8TAU0 364 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 ANKS1AQ92625 1134 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 GMCL1Q96IK5 515 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 SLF1Q9BQI6 1058 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 MTA3Q9BTC8 594 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 ANP32EQ9BTT0 268 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 EFCC1Q9HA90 598 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 RABGAP1Q9Y3P9 1069 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 PARP14Q460N5 1801 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 MYPNQ86TC9 1320 aa10.76□□□□□ -0.69
CACNA1A-239ENST00000637297 CCDC69A6NI79 296 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 ZBED4O75132 1171 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 ERVK-24P63145 666 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 RABEP1Q15276 862 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 WDR78Q5VTH9 848 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 BLOC1S2Q6QNY1 142 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 SYNE3Q6ZMZ3 975 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 CTU1Q7Z7A3 348 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 CATIPQ7Z7H3 387 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 SNX21Q969T3 373 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 COA7Q96BR5 231 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 ATG4CQ96DT6 458 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 GPCPD1Q9NPB8 672 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 FBXO28Q9NVF7 368 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 RBPJLQ9UBG7 517 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 PPP1R9AQ9ULJ8 1098 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 TRIM17Q9Y577 477 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 SNX14Q9Y5W7 946 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 MYH6P13533 1939 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 FRMPD2Q68DX3 1309 aaPredicted RBP10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 ADGRA2Q96PE1 1338 aa10.75□□□□□ -0.69
CACNA1A-239ENST00000637297 RLFQ13129 1914 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 TNPO2O14787 897 aaKnown RBP10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 GNRH1P01148 92 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 PARP1P09874 1014 aaKnown RBP10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 FDX1P10109 184 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 PDHBP11177 359 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 ANTXR2P58335 489 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 SEC23AQ15436 765 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 Q3C1V9 767 aa10.74□□□□□ -0.69
CACNA1A-239ENST00000637297 ADCK5Q3MIX3 580 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms