RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 FUT2Q10981 343 aa12.43□□□□□ -0.42
CLN5-213ENST00000636681 CCDC96Q2M329 555 aa12.43□□□□□ -0.42
CLN5-213ENST00000636681 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
CLN5-213ENST00000636681 C2orf69Q8N8R5 385 aa12.43□□□□□ -0.42
CLN5-213ENST00000636681 ZNF280CQ8ND82 737 aa12.43□□□□□ -0.42
CLN5-213ENST00000636681 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
CLN5-213ENST00000636681 FBXO28Q9NVF7 368 aa12.43□□□□□ -0.42
CLN5-213ENST00000636681 NID2Q14112 1375 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 PALM3A6NDB9 673 aaPredicted RBP12.42□□□□□ -0.42
CLN5-213ENST00000636681 SNHG28P0DPA3 235 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 HUNKP57058 714 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 TMTC3Q6ZXV5 915 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 WDR18Q9BV38 432 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 VAT1LQ9HCJ6 419 aa12.42□□□□□ -0.42
CLN5-213ENST00000636681 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 USP17L10C9JJH3 530 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
CLN5-213ENST00000636681 NT5C2P49902 561 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 BACE1P56817 501 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 HTRA3P83110 453 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
CLN5-213ENST00000636681 SHISA4Q96DD7 197 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 SLC10A4Q96EP9 437 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 KIAA1683Q9H0B3 1180 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 PEX10O60683 326 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
CLN5-213ENST00000636681 GJB2P29033 226 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 SLC1A4P43007 532 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 PKP1Q13835 747 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 ERO1BQ86YB8 467 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 CTCFLQ8NI51 663 aaPredicted RBP12.41□□□□□ -0.42
CLN5-213ENST00000636681 WNK4Q96J92 1243 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
CLN5-213ENST00000636681 VCAM1P19320 739 aa12.4□□□□□ -0.42
CLN5-213ENST00000636681 MOGSQ13724 837 aa12.4□□□□□ -0.42
CLN5-213ENST00000636681 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
CLN5-213ENST00000636681 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
CLN5-213ENST00000636681 ZIC5Q96T25 663 aa12.4□□□□□ -0.42
CLN5-213ENST00000636681 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
CLN5-213ENST00000636681 CPLX1O14810 134 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 CALM1P0DP23 149 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 CALM2P0DP24 149 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 CALM3P0DP25 149 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 BMP3P12645 472 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 PPATQ06203 517 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 PIGSQ96S52 555 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
CLN5-213ENST00000636681 AS3MTQ9HBK9 375 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
CLN5-213ENST00000636681 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
CLN5-213ENST00000636681 IFNAR1P17181 557 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 GRM1Q13255 1194 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 PPIL2Q13356 520 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 PKN1Q16512 942 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 ADGRF4Q8IZF3 695 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 JMJD4Q9H9V9 463 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 A0A0G2JLL6 359 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 PPP1R11O60927 126 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 RCAN1P53805 252 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 FKBP1BP68106 108 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 ASPRV1Q53RT3 343 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 PRRT2Q7Z6L0 340 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 RASAL3Q86YV0 1011 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.43
CLN5-213ENST00000636681 MS4A4AQ96JQ5 239 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 MAP3K14Q99558 947 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 TANGO6Q9C0B7 1094 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 ABT1Q9ULW3 272 aaKnown RBP12.38□□□□□ -0.43
CLN5-213ENST00000636681 KCNH4Q9UQ05 1017 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
CLN5-213ENST00000636681 TCHHQ07283 1943 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 TMEM88BA6NKF7 163 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 FMNL1O95466 1100 aaPredicted RBP12.37□□□□□ -0.43
CLN5-213ENST00000636681 KIF5BP33176 963 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms