RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 SH3RF1Q7Z6J0 888 aa25.14■■□□□ 1.62
CHRNA7-204ENST00000635722 MB21D1Q8N884 522 aa25.14■■□□□ 1.62
CHRNA7-204ENST00000635722 LENG1Q96BZ8 264 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-204ENST00000635722 ZBED9Q6R2W3 1325 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 USP17L12C9JPN9 530 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 USP17L21D6R901 530 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 WDR46O15213 610 aaKnown RBP25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 LRRC41Q15345 812 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 C12orf60Q5U649 245 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 MROH8Q9H579 483 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 PDLIM7Q9NR12 457 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 ZBTB40Q9NUA8 1239 aa25.13■■□□□ 1.61
CHRNA7-204ENST00000635722 EEF2P13639 858 aaKnown RBP25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 TAL1P17542 331 aaPredicted RBP25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 SNX17Q15036 470 aa25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 SHHQ15465 462 aa25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 C16orf86Q6ZW13 317 aa25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 ARRDC4Q8NCT1 418 aa25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 ATP8A2Q9NTI2 1148 aa25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 PRKAG2Q9UGJ0 569 aa25.12■■□□□ 1.61
CHRNA7-204ENST00000635722 TRIM43BA6NCK2 446 aa25.11■■□□□ 1.61
CHRNA7-204ENST00000635722 ATP5JP18859 108 aa25.11■■□□□ 1.61
CHRNA7-204ENST00000635722 ABRAQ8N0Z2 381 aa25.11■■□□□ 1.61
CHRNA7-204ENST00000635722 BADQ92934 168 aa25.11■■□□□ 1.61
CHRNA7-204ENST00000635722 TRIM43Q96BQ3 446 aaPredicted RBP25.11■■□□□ 1.61
CHRNA7-204ENST00000635722 HAUS7Q99871 368 aa25.11■■□□□ 1.61
CHRNA7-204ENST00000635722 FCER1AP12319 257 aa25.1■■□□□ 1.61
CHRNA7-204ENST00000635722 RPAP2Q8IXW5 612 aaPredicted RBP25.1■■□□□ 1.61
CHRNA7-204ENST00000635722 NUP88Q99567 741 aaPredicted RBP25.1■■□□□ 1.61
CHRNA7-204ENST00000635722 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.1■■□□□ 1.61
CHRNA7-204ENST00000635722 SH2D4AQ9H788 454 aa25.1■■□□□ 1.61
CHRNA7-204ENST00000635722 SPTBN5Q9NRC6 3674 aaKnown RBP25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 RAD21O60216 631 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 SMARCA5O60264 1052 aaPredicted RBP25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 HMMRO75330 724 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 FAM83BQ5T0W9 1011 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 FAM109BQ6ICB4 259 aaPredicted RBP25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 CTR9Q6PD62 1173 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 MMP19Q99542 508 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 PUS7LQ9H0K6 701 aaKnown RBP25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 ADAMTS5Q9UNA0 930 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 SLC4A4Q9Y6R1 1079 aa25.09■■□□□ 1.61
CHRNA7-204ENST00000635722 PGK1P00558 417 aa25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 ITGB8P26012 769 aa25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 STK11IPQ8N1F8 1099 aa25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 REPS2Q8NFH8 660 aa25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 CCDC17Q96LX7 622 aa25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 ZNF214Q9UL59 606 aaPredicted RBP25.08■■□□□ 1.61
CHRNA7-204ENST00000635722 VWA5AO00534 786 aa25.07■■□□□ 1.6
CHRNA7-204ENST00000635722 RAB11FIP3O75154 756 aa25.07■■□□□ 1.6
CHRNA7-204ENST00000635722 XPNPEP3Q9NQH7 507 aa25.07■■□□□ 1.6
CHRNA7-204ENST00000635722 SLC5A4Q9NY91 659 aa25.07■■□□□ 1.6
CHRNA7-204ENST00000635722 PPP1R9AQ9ULJ8 1098 aa25.07■■□□□ 1.6
CHRNA7-204ENST00000635722 DDX19BQ9UMR2 479 aa25.07■■□□□ 1.6
CHRNA7-204ENST00000635722 TLE2Q04725 743 aa25.06■■□□□ 1.6
CHRNA7-204ENST00000635722 ZNF697Q5TEC3 545 aa25.06■■□□□ 1.6
CHRNA7-204ENST00000635722 RIOX2Q8IUF8 465 aa25.06■■□□□ 1.6
CHRNA7-204ENST00000635722 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.06■■□□□ 1.6
CHRNA7-204ENST00000635722 COL25A1Q9BXS0 654 aaPredicted RBP25.06■■□□□ 1.6
CHRNA7-204ENST00000635722 SLC25A27O95847 323 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 EPHB4P54760 987 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 UBE3CQ15386 1083 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 ZNF792Q3KQV3 632 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 TINF2Q9BSI4 451 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 KANSL2Q9H9L4 492 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 PHF24Q9UPV7 400 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 MYH4Q9Y623 1939 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 ROBO3Q96MS0 1386 aa25.05■■□□□ 1.6
CHRNA7-204ENST00000635722 MCM3APO60318 1980 aa25.04■■□□□ 1.6
CHRNA7-204ENST00000635722 RARBP10826 455 aa25.04■■□□□ 1.6
CHRNA7-204ENST00000635722 STAT3P40763 770 aa25.04■■□□□ 1.6
CHRNA7-204ENST00000635722 C20orf194Q5TEA3 1177 aa25.04■■□□□ 1.6
CHRNA7-204ENST00000635722 A0A1W2PQ45 241 aaPredicted RBP25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 A0A1W2PQY0 241 aa25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 ZNF865P0CJ78 1059 aaPredicted RBP25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 KCTD2Q14681 263 aa25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 TSHZ3Q63HK5 1081 aa25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 AMOTL1Q8IY63 956 aa25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 CDX2Q99626 313 aaPredicted RBP25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 TTYH1Q9H313 450 aaPredicted RBP25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 GOPCQ9HD26 462 aa25.03■■□□□ 1.6
CHRNA7-204ENST00000635722 PQBP1O60828 265 aaKnown RBP25.02■■□□□ 1.6
CHRNA7-204ENST00000635722 RASA1P20936 1047 aa25.02■■□□□ 1.6
CHRNA7-204ENST00000635722 IRX5P78411 483 aaPredicted RBP25.02■■□□□ 1.6
CHRNA7-204ENST00000635722 RIPK3Q9Y572 518 aa25.02■■□□□ 1.6
CHRNA7-204ENST00000635722 MS4A1P11836 297 aa25.01■■□□□ 1.59
CHRNA7-204ENST00000635722 C1orf53Q5VUE5 145 aa25.01■■□□□ 1.59
CHRNA7-204ENST00000635722 DDRGK1Q96HY6 314 aa25.01■■□□□ 1.59
CHRNA7-204ENST00000635722 EPB41L4AQ9HCS5 686 aaPredicted RBP25.01■■□□□ 1.59
CHRNA7-204ENST00000635722 ADAMTS4O75173 837 aa25■■□□□ 1.59
CHRNA7-204ENST00000635722 NDUFB10O96000 172 aa25■■□□□ 1.59
CHRNA7-204ENST00000635722 CLTBP09497 229 aa25■■□□□ 1.59
CHRNA7-204ENST00000635722 SNRNP48Q6IEG0 339 aaKnown RBP25■■□□□ 1.59
CHRNA7-204ENST00000635722 MYLIPQ8WY64 445 aa25■■□□□ 1.59
CHRNA7-204ENST00000635722 STRBPQ96SI9 672 aaKnown RBP25■■□□□ 1.59
CHRNA7-204ENST00000635722 SEMA6BQ9H3T3 888 aa25■■□□□ 1.59
CHRNA7-204ENST00000635722 ARPP21Q9UBL0 812 aaPredicted RBP25■■□□□ 1.59
CHRNA7-204ENST00000635722 NRBP1Q9UHY1 535 aa25■■□□□ 1.59
CHRNA7-204ENST00000635722 SYNRGQ9UMZ2 1314 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms