RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GPRC5AQ8NFJ5 357 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 EFCC1Q9HA90 598 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 ADAMTS5Q9UNA0 930 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 GNRH1P01148 92 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 BMP3P12645 472 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 MCCP23508 829 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 ERVK-9P63128 1117 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 ERVK-24P63145 666 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
LINC00339-210ENST00000635675 TSGA10IPQ3SY00 556 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 ENAHQ8N8S7 591 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-210ENST00000635675 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 ATG4CQ96DT6 458 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 MCOLN1Q9GZU1 580 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 BTBD7Q9P203 1132 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 ZSWIM8A7E2V4 1837 aa11.45□□□□□ -0.58
LINC00339-210ENST00000635675 MGAMO43451 1857 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-210ENST00000635675 REC8O95072 547 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-210ENST00000635675 SLC1A4P43007 532 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 FCGRTP55899 365 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 SEC23AQ15436 765 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 RALYLQ86SE5 291 aaKnown RBP11.44□□□□□ -0.58
LINC00339-210ENST00000635675 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-210ENST00000635675 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 KCNB2Q92953 911 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 SLF1Q9BQI6 1058 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 PAGR1Q9BTK6 254 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 PPP1R9AQ9ULJ8 1098 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 TNKSO95271 1327 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 DOCK3Q8IZD9 2030 aa11.44□□□□□ -0.58
LINC00339-210ENST00000635675 VWA5AO00534 786 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 EPB41L2O43491 1005 aaKnown RBP11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PLA2G6O60733 806 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 ANTXR2P58335 489 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 COL9A3Q14050 684 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-210ENST00000635675 FBXO46Q6PJ61 603 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-210ENST00000635675 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PRPF38AQ8NAV1 312 aaKnown RBP11.43□□□□□ -0.58
LINC00339-210ENST00000635675 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PORCNQ9H237 461 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 SRRDQ9UH36 339 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 FEM1BQ9UK73 627 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PTPN22Q9Y2R2 807 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 TMEM232C9JQI7 657 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 TNPO2O14787 897 aaKnown RBP11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PDHBP11177 359 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 HOXD10P28358 340 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 MAPK4P31152 587 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 HSPA4P34932 840 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PRMT2P55345 433 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 TMEM132BQ14DG7 1078 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-210ENST00000635675 KCTD1Q719H9 257 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 CHST3Q7LGC8 479 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 PNMA1Q8ND90 353 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 IGDCC4Q8TDY8 1250 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 CHURC1Q8WUH1 139 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 KAT14Q9H8E8 782 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 MTMR7Q9Y216 660 aa11.43□□□□□ -0.58
LINC00339-210ENST00000635675 IFIT3O14879 490 aaKnown RBP11.42□□□□□ -0.58
LINC00339-210ENST00000635675 ZKSCAN1P17029 563 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-210ENST00000635675 STAT2P52630 851 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 CCNA1P78396 465 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
LINC00339-210ENST00000635675 BTNL9Q6UXG8 535 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 FAM160B2Q86V87 743 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 COA7Q96BR5 231 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 MOV10L1Q9BXT6 1211 aaKnown RBP11.42□□□□□ -0.58
LINC00339-210ENST00000635675 USP26Q9BXU7 913 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 SPATC1LQ9H0A9 340 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 GJD2Q9UKL4 321 aa11.42□□□□□ -0.58
LINC00339-210ENST00000635675 ZNF214Q9UL59 606 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-210ENST00000635675 COL11A1P12107 1806 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-210ENST00000635675 ATP2A1O14983 1001 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 PRC1O43663 620 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 FDX1P10109 184 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 MCM5P33992 734 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 PRKCZQ05513 592 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 ZNF543Q08ER8 600 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 KRT32Q14532 448 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 SART3Q15020 963 aaKnown RBP11.41□□□□□ -0.58
LINC00339-210ENST00000635675 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 ADCK5Q3MIX3 580 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms