RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 C6orf222P0C671 652 aaPredicted RBP9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 JMJD7P0C870 316 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 PF4V1P10720 104 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 PYGMP11217 842 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 SELPP16109 830 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 GRB10Q13322 594 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 EPM2AIP1Q7L775 607 aaPredicted RBP9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 CBARPQ8N350 705 aaPredicted RBP9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 REV1Q9UBZ9 1251 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 GTF2A1LQ9UNN4 478 aa9.21□□□□□ -0.93
SMARCA2-243ENST00000635590 A0A1B0GTH6 734 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 ZEB2O60315 1214 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 PRKD3O94806 890 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 ASLP04424 464 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 GALEQ14376 348 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 PDILTQ8N807 584 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 CLIP3Q96DZ5 547 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 NSUN5Q96P11 429 aaKnown RBP9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 CNNM2Q9H8M5 875 aa9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 PNMA8BQ9ULN7 279 aaPredicted RBP9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 APOBEC2Q9Y235 224 aaKnown RBP9.21□□□□□ -0.94
SMARCA2-243ENST00000635590 NBNO60934 754 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 B3GALT4O96024 378 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 FGFR1P11362 822 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 PABPC1P11940 636 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 HOXD8P13378 290 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 WDR4P57081 412 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 GJA10Q969M2 543 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 ANLNQ9NQW6 1124 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 DDX20Q9UHI6 824 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 IPPQ9Y573 584 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 WASF2Q9Y6W5 498 aa9.2□□□□□ -0.94
SMARCA2-243ENST00000635590 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 GFRA2O00451 464 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 PRODHO43272 600 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 GRIA2P42262 883 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 PLAURQ03405 335 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 MLECQ14165 292 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 CDCP2Q5VXM1 449 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 NSMFQ6X4W1 530 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 IFNL2Q8IZJ0 200 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 GSTCDQ8NEC7 633 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 TRMT2BQ96GJ1 504 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 MENTQ9BUN1 341 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 EMILIN2Q9BXX0 1053 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 POLMQ9NP87 494 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 RCAN3Q9UKA8 241 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 PHTF1Q9UMS5 762 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 ANKRD6Q9Y2G4 727 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 LMTK3Q96Q04 1460 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SNUPNO95149 360 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 MYBL2P10244 700 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 ZNF143P52747 638 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 PTPN5P54829 565 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 CHAF1AQ13111 956 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 ZNF423Q2M1K9 1284 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 WDR44Q5JSH3 913 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 L1TD1Q5T7N2 865 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SAMD5Q5TGI4 173 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SCARA3Q6AZY7 606 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SCLYQ96I15 445 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 FUBP3Q96I24 572 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 LRP2BPQ9P2M1 347 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 SUSD2Q9UGT4 822 aa9.19□□□□□ -0.94
SMARCA2-243ENST00000635590 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 M0R2C6 588 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 NFKB1P19838 968 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 IARSP41252 1262 aaKnown RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 SLC4A8Q2Y0W8 1093 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 CFAP100Q494V2 611 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 CCDC174Q6PII3 467 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 CPA6Q8N4T0 437 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 C1orf131Q8NDD1 294 aaKnown RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 PARD3BQ8TEW8 1205 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 TRERF1Q96PN7 1200 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 CDC5LQ99459 802 aaKnown RBP9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 GTF2IRD1Q9UHL9 959 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 RAB3GAP2Q9H2M9 1393 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 LRRC9Q6ZRR7 1453 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 ABCA8O94911 1581 aa9.18□□□□□ -0.94
SMARCA2-243ENST00000635590 PCF11O94913 1555 aaKnown RBP9.17□□□□□ -0.94
SMARCA2-243ENST00000635590 PMM2O15305 246 aa9.17□□□□□ -0.94
SMARCA2-243ENST00000635590 TIMM44O43615 452 aa9.17□□□□□ -0.94
SMARCA2-243ENST00000635590 ITGAVP06756 1048 aa9.17□□□□□ -0.94
SMARCA2-243ENST00000635590 TIMP2P16035 220 aa9.17□□□□□ -0.94
SMARCA2-243ENST00000635590 LPOP22079 712 aaPredicted RBP9.17□□□□□ -0.94
SMARCA2-243ENST00000635590 CCND1P24385 295 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms