RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 ZNF843Q8N446 348 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 PPP2R3CQ969Q6 453 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 NEK1Q96PY6 1258 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 SCNM1Q9BWG6 230 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 FTOQ9C0B1 505 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 SMOC2Q9H3U7 446 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 PARD6AQ9NPB6 346 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 FLRT1Q9NZU1 646 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 SMG5Q9UPR3 1016 aaKnown RBP4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 AFG3L2Q9Y4W6 797 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 UBR5O95071 2799 aaPredicted RBP4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 TEX15Q9BXT5 2789 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 DMDP11532 3685 aa4.03□□□□□ -1.76
SCARNA4.1-201ENST00000628597 MED23Q9ULK4 1368 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CFAP46Q8IYW2 2715 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 DDX60Q8IY21 1712 aaKnown RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 POLQO75417 2590 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 A0A0U1RQG5 324 aaPredicted RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 KCNQ3O43525 872 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 BRD1O95696 1058 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 NCLP19338 710 aaKnown RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TGM1P22735 817 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 VASPP50552 380 aaPredicted RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CDK7P50613 346 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FXR2P51116 673 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 EIF4G2P78344 907 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CCNA1P78396 465 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TBC1D8BQ0IIM8 1120 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 GPM6BQ13491 265 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CTC1Q2NKJ3 1217 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TREML2Q5T2D2 321 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CWF19L1Q69YN2 538 aaKnown RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 C1orf210Q8IVY1 113 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 DZIP1LQ8IYY4 767 aaKnown RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PROCA1Q8NCQ7 364 aaPredicted RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 RAD9AQ99638 391 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ASCC2Q9H1I8 757 aaPredicted RBP4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 MBIPQ9NS73 344 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SLC5A4Q9NY91 659 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 POLKQ9UBT6 870 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ZNF112Q9UJU3 913 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FBXL21Q9UKT6 434 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PTPRQQ9UMZ3 2332 aa4.02□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PCNX1Q96RV3 2341 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CHD9Q3L8U1 2897 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 LINC01553A4QN01 128 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SLC15A5A6NIM6 579 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ATXN7O15265 892 aaPredicted RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PER1O15534 1290 aaPredicted RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 HTATSF1O43719 755 aaKnown RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 LRP3O75074 770 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 MYL6BP14649 208 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SMPD1P17405 629 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ATF7P17544 494 aaPredicted RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PTPRAP18433 802 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TROAPQ12815 778 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SERINC3Q13530 473 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CCDC6Q16204 474 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 AASDHQ4L235 1098 aaPredicted RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SNRNP48Q6IEG0 339 aaKnown RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PSAPL1Q6NUJ1 521 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PRR23CQ6ZRP0 262 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FAM83AQ86UY5 434 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ANKRD18AQ8IVF6 992 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FAM126BQ8IXS8 530 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SCYL3Q8IZE3 742 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PLCD3Q8N3E9 789 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CERS5Q8N5B7 392 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 LSM14AQ8ND56 463 aaKnown RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 LIN37Q96GY3 246 aaPredicted RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SCLYQ96I15 445 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SAMD11Q96NU1 681 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PAGR1Q9BTK6 254 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SERPINA10Q9UK55 444 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 NR2E1Q9Y466 385 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 USP15Q9Y4E8 981 aaPredicted RBP4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 NDUFB9Q9Y6M9 179 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 RLFQ13129 1914 aa4.01□□□□□ -1.77
SCARNA4.1-201ENST00000628597 UMODL1Q5DID0 1318 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SALL3Q9BXA9 1300 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SMG1Q96Q15 3661 aaKnown RBP4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PYCARD-AS1I3L0S3 204 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 GDF9O60383 454 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TBX10O75333 385 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 BAIAP3O94812 1187 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CFHP08603 1231 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 HOXC6P09630 235 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 HSP90B1P14625 803 aaKnown RBP4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 NDUFV2P19404 249 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 POU3F2P20265 443 aaPredicted RBP4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 PTPREP23469 700 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 KCNJ4P48050 445 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CCT4P50991 539 aaKnown RBP4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 NOVA1P51513 510 aaKnown RBP4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CACNB3P54284 484 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FKBP1AP62942 108 aaKnown RBP4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ERVK-9P63128 1117 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ERVK-24P63145 666 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CFHR1Q03591 330 aa4□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ZNF252P-AS1Q0IIN9 211 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms