RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CRACR2BQ8N4Y2 399 aaPredicted RBP11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 FANCBQ8NB91 859 aa11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 DPF2Q92785 391 aa11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 DNAJC18Q9H819 358 aa11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 ORC3Q9UBD5 711 aaPredicted RBP11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 CNOT7Q9UIV1 285 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 COL2A1P02458 1487 aaPredicted RBP11.57□□□□□ -0.56
SOX2-OT-244ENST00000627738 ATRNL1Q5VV63 1379 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 CCDC196A0A1B0GTZ2 297 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 FAM196BA6NMK8 535 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 H3BQV1 296 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 CALM1P0DP23 149 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 CALM2P0DP24 149 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 CALM3P0DP25 149 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 PDIA4P13667 645 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 PRSS12P56730 875 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 TROAPQ12815 778 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 AMHR2Q16671 573 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 CDC37L1Q7L3B6 337 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 FOXP4Q8IVH2 680 aaPredicted RBP11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 FAM151AQ8WW52 585 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 PHKBQ93100 1093 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 TRIM34Q9BYJ4 488 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 STX8Q9UNK0 236 aa11.56□□□□□ -0.56
SOX2-OT-244ENST00000627738 CNTNAP1P78357 1384 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 PLIN4Q96Q06 1357 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 DICER1Q9UPY3 1922 aaKnown RBP11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 EGFRP00533 1210 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 IFNAR1P17181 557 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 COL9A1P20849 921 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 PPP2R5BQ15173 497 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 FOXD4L6Q3SYB3 417 aaPredicted RBP11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 FOXD4L3Q6VB84 417 aaPredicted RBP11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 CMTR1Q8N1G2 835 aaKnown RBP11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 PNMA1Q8ND90 353 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 CEP95Q96GE4 821 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 CHAMP1Q96JM3 812 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 CSRNP1Q96S65 589 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 TMEM47Q9BQJ4 181 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 SLC26A6Q9BXS9 759 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 RBM28Q9NW13 759 aaKnown RBP11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 RNF181Q9P0P0 153 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 SBF1O95248 1867 aa11.55□□□□□ -0.56
SOX2-OT-244ENST00000627738 MYH8P13535 1937 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 MPHOSPH10O00566 681 aaKnown RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 PLEKHA8P1O95397 391 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 FMNL1O95466 1100 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 OATP04181 439 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 NOVP48745 357 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 FERMT3Q86UX7 667 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 FAM83AQ86UY5 434 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 METTL16Q86W50 562 aaKnown RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 GPC2Q8N158 579 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 CCDC82Q8N4S0 544 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 CTCFLQ8NI51 663 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 CCDC17Q96LX7 622 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 STK36Q9NRP7 1315 aa11.54□□□□□ -0.56
SOX2-OT-244ENST00000627738 DDX11L8A8MPP1 907 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 UBE2Q2LH0YL09 131 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 H7C1D1 291 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 TNNI2P48788 182 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 GRM4Q14833 912 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 MCTP1Q6DN14 999 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 OTUD7BQ6GQQ9 843 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 TATDN1Q6P1N9 297 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 NBPF11Q86T75 865 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 CLEC10AQ8IUN9 316 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 TRIM22Q8IYM9 498 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 C8orf76Q96K31 380 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 ALG1Q9BT22 464 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 MTMR7Q9Y216 660 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 ATP6V1DQ9Y5K8 247 aa11.53□□□□□ -0.56
SOX2-OT-244ENST00000627738 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 GOLGA6L22H0YM25 854 aa11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 KIF5BP33176 963 aa11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 MDM2Q00987 491 aaPredicted RBP11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 FUT2Q10981 343 aa11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 C9orf131Q5VYM1 1079 aa11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 TMTC3Q6ZXV5 915 aa11.52□□□□□ -0.57
SOX2-OT-244ENST00000627738 MAP3K14Q99558 947 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms