RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CHRNDQ07001 517 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 U2AF1L4Q8WU68 220 aaKnown RBP14.15□□□□□ -0.14
SCN8A-209ENST00000627620 PCDHA12Q9UN75 941 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 P4HA1P13674 534 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 CARD10Q9BWT7 1032 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 MKRN1Q9UHC7 482 aaKnown RBP14.15□□□□□ -0.14
SCN8A-209ENST00000627620 CSADQ9Y600 493 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 FGAP02671 866 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 BTDP43251 543 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 GABPAQ06546 454 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 CASC4Q6P4E1 433 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 PAGR1Q9BTK6 254 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 MLXIPQ9HAP2 919 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 HHATQ5VTY9 493 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 KRBA2Q6ZNG9 492 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 C10orf67Q8IYJ2 551 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 NSMCE1Q8WV22 266 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 TCP10L2B9ZVM9 353 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 SCG2P13521 617 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 STAT1P42224 750 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 YWHAEP62258 255 aaKnown RBP14.14□□□□□ -0.15
SCN8A-209ENST00000627620 MORC3Q14149 939 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 DOK7Q18PE1 504 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 CERKLQ49MI3 558 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-209ENST00000627620 KIAA0825Q8IV33 1275 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 METTL13Q8N6R0 699 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 GPKOWQ92917 476 aaPredicted RBP eCLIP14.14□□□□□ -0.15
SCN8A-209ENST00000627620 CCDC51Q96ER9 411 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 NOL3O60936 208 aaKnown RBP14.14□□□□□ -0.15
SCN8A-209ENST00000627620 POLR2MP0CAP2 368 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 ERCC6LQ2NKX8 1250 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 MCTP2Q6DN12 878 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 NEK8Q86SG6 692 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 CEP85LQ5SZL2 805 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 LGSNQ5TDP6 509 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 MRPL11Q9Y3B7 192 aaKnown RBP14.14□□□□□ -0.15
SCN8A-209ENST00000627620 NR1I2O75469 434 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 OR52Z1P0C646 297 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 PPARDQ03181 441 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 LONRF2Q1L5Z9 754 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-209ENST00000627620 CCDC89Q8N998 374 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 MAIP1Q8WWC4 291 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 AMFRQ9UKV5 643 aa14.14□□□□□ -0.15
SCN8A-209ENST00000627620 GIPC1O14908 333 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 NEDD9Q14511 834 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 SND1Q7KZF4 910 aaKnown RBP eCLIP14.13□□□□□ -0.15
SCN8A-209ENST00000627620 SLFN12Q8IYM2 578 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 TTLL3Q9Y4R7 772 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 OR8K1Q8NGG5 319 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 ST7Q9NRC1 585 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 ADGRL2O95490 1459 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 KRT15P19012 456 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 ATP11AP98196 1134 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 BCS1LQ9Y276 419 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 GKAP1Q5VSY0 366 aaPredicted RBP14.13□□□□□ -0.15
SCN8A-209ENST00000627620 ZMYND15Q9H091 742 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 HGSO14964 777 aaPredicted RBP14.13□□□□□ -0.15
SCN8A-209ENST00000627620 ABCB4P21439 1286 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 YARSP54577 528 aaKnown RBP14.13□□□□□ -0.15
SCN8A-209ENST00000627620 MTMR3Q13615 1198 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 XKR9Q5GH70 373 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 FBXO11Q86XK2 927 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 HACE1Q8IYU2 909 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 PANK4Q9NVE7 773 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
SCN8A-209ENST00000627620 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 MED23Q9ULK4 1368 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 A6NNZ2 444 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 SORBS3O60504 671 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 DDAH1O94760 285 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 BAG6P46379 1132 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 ICA1Q05084 483 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 TUBB8Q3ZCM7 444 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 AFAP1L2Q8N4X5 818 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 RABEP2Q9H5N1 569 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 GREM2Q9H772 168 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 DDX25Q9UHL0 483 aaKnown RBP14.12□□□□□ -0.15
SCN8A-209ENST00000627620 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 INSRP06213 1382 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 BTBD18B2RXH4 712 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 CMA1P23946 247 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 LTKP29376 864 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 LIG4P49917 911 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 RIOK1Q9BRS2 568 aaKnown RBP14.12□□□□□ -0.15
SCN8A-209ENST00000627620 PLEKHA4Q9H4M7 779 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 MTMR6Q9Y217 621 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 SAR1BQ9Y6B6 198 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 ADCY9O60503 1353 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 TBC1D8O95759 1140 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 ZNF131P52739 623 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 SDCCAG8Q86SQ7 713 aaPredicted RBP14.12□□□□□ -0.15
SCN8A-209ENST00000627620 FLAD1Q8NFF5 587 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 VPS37BQ9H9H4 285 aa14.12□□□□□ -0.15
SCN8A-209ENST00000627620 ARMCX3Q9UH62 379 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms