RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 SH2D4AQ9H788 454 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 TDRD3Q9H7E2 651 aaKnown RBP9.97□□□□□ -0.81
CHD2-211ENST00000627460 MTMR4Q9NYA4 1195 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 NYAP2Q9P242 653 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 CEP131Q9UPN4 1083 aa9.97□□□□□ -0.81
CHD2-211ENST00000627460 IGKV6D-41A0A0C4DH26 115 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 FIBPO43427 364 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 MMP1P03956 469 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 U2AF2P26368 475 aaKnown RBP eCLIP9.96□□□□□ -0.82
CHD2-211ENST00000627460 RILPL1Q5EBL4 403 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 L1TD1Q5T7N2 865 aaKnown RBP9.96□□□□□ -0.82
CHD2-211ENST00000627460 KRT40Q6A162 431 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 TATDN1Q6P1N9 297 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 NBPF11Q86T75 865 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 USP48Q86UV5 1035 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 FERMT3Q86UX7 667 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 TEX2Q8IWB9 1127 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 PHKBQ93100 1093 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 CEP95Q96GE4 821 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 PRMT6Q96LA8 375 aaPredicted RBP9.96□□□□□ -0.82
CHD2-211ENST00000627460 CSRNP1Q96S65 589 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 SENP2Q9HC62 589 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 MYOZ2Q9NPC6 264 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 IL17RBQ9NRM6 502 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 ZNF70Q9UC06 446 aaPredicted RBP9.96□□□□□ -0.82
CHD2-211ENST00000627460 FAM198AQ9UFP1 575 aa9.96□□□□□ -0.82
CHD2-211ENST00000627460 SEC63Q9UGP8 760 aaKnown RBP9.96□□□□□ -0.82
CHD2-211ENST00000627460 NOL7Q9UMY1 257 aaKnown RBP9.96□□□□□ -0.82
CHD2-211ENST00000627460 H7C1D1 291 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
CHD2-211ENST00000627460 SCG2P13521 617 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 SHMT1P34896 483 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 KIF23Q02241 960 aaPredicted RBP9.95□□□□□ -0.82
CHD2-211ENST00000627460 TCP10Q12799 353 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 NFIAQ12857 509 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 SF3A1Q15459 793 aaKnown RBP9.95□□□□□ -0.82
CHD2-211ENST00000627460 PFKFB3Q16875 520 aaPredicted RBP9.95□□□□□ -0.82
CHD2-211ENST00000627460 SLC4A8Q2Y0W8 1093 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 MYSM1Q5VVJ2 828 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 RAB11FIP4Q86YS3 637 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 GPC2Q8N158 579 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 SLC44A5Q8NCS7 719 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 DCAF4Q8WV16 495 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 RRP36Q96EU6 259 aaKnown RBP9.95□□□□□ -0.82
CHD2-211ENST00000627460 GLT8D2Q9H1C3 349 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.95□□□□□ -0.82
CHD2-211ENST00000627460 ARHGEF10LQ9HCE6 1279 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 RTEL1Q9NZ71 1219 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 CNPY2Q9Y2B0 182 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 PPP2R3BQ9Y5P8 575 aa9.95□□□□□ -0.82
CHD2-211ENST00000627460 CNTNAP5Q8WYK1 1306 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 PALM3A6NDB9 673 aaPredicted RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 KLRF2D3W0D1 207 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 NMT2O60551 498 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 GNA11P29992 359 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 KRT2P35908 639 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 TRAPPC10P48553 1259 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 PDE4DQ08499 809 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 FUT2Q10981 343 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 MAP2K5Q13163 448 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 ABCB5Q2M3G0 1257 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 DCAF15Q66K64 600 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 MCTP2Q6DN12 878 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 APOBEC3FQ8IUX4 373 aaKnown RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 NOSTRINQ8IVI9 506 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 LEO1Q8WVC0 666 aaPredicted RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 MKL1Q969V6 931 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 ZBED3Q96IU2 234 aaPredicted RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 VEZTQ9HBM0 779 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 GPBP1L1Q9HC44 474 aaPredicted RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 DDX19AQ9NUU7 478 aaKnown RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 RCOR1Q9UKL0 485 aa9.94□□□□□ -0.82
CHD2-211ENST00000627460 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
CHD2-211ENST00000627460 DDTLA6NHG4 134 aaPredicted RBP9.93□□□□□ -0.82
CHD2-211ENST00000627460 TCP10L2B9ZVM9 353 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 SMIM22K7EJ46 135 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 WNT10BO00744 389 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 AKR1B1P15121 316 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 NASPP49321 788 aaPredicted RBP9.93□□□□□ -0.82
CHD2-211ENST00000627460 NLRP5P59047 1200 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 GUCY1B3Q02153 619 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 ICA1Q05084 483 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 STK38Q15208 465 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
CHD2-211ENST00000627460 CCDC183Q5T5S1 534 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 PPP1R18Q6NYC8 613 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
CHD2-211ENST00000627460 CCDC73Q6ZRK6 1079 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 ARHGAP27Q6ZUM4 889 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 DIS3L2Q8IYB7 885 aaKnown RBP9.93□□□□□ -0.82
CHD2-211ENST00000627460 GMCL1P1Q8NEA9 526 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 NKX2-3Q8TAU0 364 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
CHD2-211ENST00000627460 CCDC34Q96HJ3 373 aa9.93□□□□□ -0.82
CHD2-211ENST00000627460 PHF20Q9BVI0 1012 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms