RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 SRPRBQ9Y5M8 271 aaKnown RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 A0A1B0GVL5 298 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 PRPF3O43395 683 aaKnown RBP9.74□□□□□ -0.85
CHD2-209ENST00000627185 NRDCO43847 1150 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 APPP05067 770 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 POLR3DP05423 398 aaPredicted RBP9.74□□□□□ -0.85
CHD2-209ENST00000627185 XBP1P17861 261 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
CHD2-209ENST00000627185 PPARAQ07869 468 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 WTAPQ15007 396 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 ZRSR1Q15695 479 aaKnown RBP9.74□□□□□ -0.85
CHD2-209ENST00000627185 CCDC178Q5BJE1 867 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 SHC4Q6S5L8 630 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 KRBA2Q6ZNG9 492 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 ANKRD18AQ8IVF6 992 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 MLKLQ8NB16 471 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.859e-6■■□□□ 14.5
CHD2-209ENST00000627185 ZNF830Q96NB3 372 aaPredicted RBP9.74□□□□□ -0.85
CHD2-209ENST00000627185 UNC93B1Q9H1C4 597 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 ATP8A2Q9NTI2 1148 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 DACH1Q9UI36 760 aa9.74□□□□□ -0.85
CHD2-209ENST00000627185 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHD2-209ENST00000627185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHD2-209ENST00000627185 FCF1Q9Y324 198 aaKnown RBP9.74□□□□□ -0.85
CHD2-209ENST00000627185 ERCC5P28715 1186 aaPredicted RBP9.73□□□□□ -0.85
CHD2-209ENST00000627185 CCZ1BP86790 482 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 CCZ1P86791 482 aaPredicted RBP9.73□□□□□ -0.85
CHD2-209ENST00000627185 MYL5Q02045 173 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 CEBPZQ03701 1054 aaKnown RBP9.73□□□□□ -0.85
CHD2-209ENST00000627185 VAC14Q08AM6 782 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 CAVIN4Q5BKX8 364 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 FERMT2Q96AC1 680 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 TMX1Q9H3N1 280 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 AATFQ9NY61 560 aaKnown RBP eCLIP9.73□□□□□ -0.85
CHD2-209ENST00000627185 NARFQ9UHQ1 456 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 FBXO2Q9UK22 296 aaPredicted RBP9.73□□□□□ -0.85
CHD2-209ENST00000627185 CCDC9Q9Y3X0 531 aaKnown RBP9.73□□□□□ -0.85
CHD2-209ENST00000627185 TACC3Q9Y6A5 838 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 SLC4A4Q9Y6R1 1079 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 COL24A1Q17RW2 1714 aa9.73□□□□□ -0.85
CHD2-209ENST00000627185 DUOX1Q9NRD9 1551 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 RPS6KA4O75676 772 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 TDO2P48775 406 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 TOB1P50616 345 aaPredicted RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 GUCY1B3Q02153 619 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 NR1H3Q13133 447 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 VPS72Q15906 364 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 DPCR1Q3MIW9 517 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 CCDC144BQ3MJ40 725 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 DNTTIP2Q5QJE6 756 aaKnown RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 OTUD7BQ6GQQ9 843 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 PDXDC2PQ6P474 469 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 NFXL1Q6ZNB6 911 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 DRC7Q8IY82 874 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 ZNF654Q8IZM8 581 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 LCORLQ8N3X6 602 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 PDCL2Q8N4E4 241 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 AOPEPQ8N6M6 819 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 SPC24Q8NBT2 197 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 ENOX1Q8TC92 643 aaKnown RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 FAM84BQ96KN1 310 aaPredicted RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 CCDC85AQ96PX6 553 aaPredicted RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 HSD3B7Q9H2F3 369 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 SEC31BQ9NQW1 1179 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 LRP2BPQ9P2M1 347 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 KCNH3Q9ULD8 1083 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 NAP1L2Q9ULW6 460 aaPredicted RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 MINPP1Q9UNW1 487 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 GPSM3Q9Y4H4 160 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 IRS2Q9Y4H2 1338 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 CACNA1SQ13698 1873 aa9.72□□□□□ -0.85
CHD2-209ENST00000627185 MYH14Q7Z406 1995 aaKnown RBP9.72□□□□□ -0.85
CHD2-209ENST00000627185 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 DTNBO60941 627 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 SKILP12757 684 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 CYP7A1P22680 504 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 GGCXP38435 758 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 TROAPQ12815 778 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 SPTY2D1Q68D10 685 aaPredicted RBP9.71□□□□□ -0.86
CHD2-209ENST00000627185 GALNT17Q6IS24 598 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 MICU3Q86XE3 530 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 IQCA1Q86XH1 822 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 DIS3L2Q8IYB7 885 aaKnown RBP9.71□□□□□ -0.86
CHD2-209ENST00000627185 STK11IPQ8N1F8 1099 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 CCDC82Q8N4S0 544 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 GLMNQ92990 594 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.86
CHD2-209ENST00000627185 UBAC1Q9BSL1 405 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 PHF20Q9BVI0 1012 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 L2HGDHQ9H9P8 463 aa9.71□□□□□ -0.86
CHD2-209ENST00000627185 SH3GLB2Q9NR46 395 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms