RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 GNRH1P01148 92 aa16■□□□□ 0.15
SOX2-OT-238ENST00000626299 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-238ENST00000626299 CHMP4CQ96CF2 233 aa16■□□□□ 0.15
SOX2-OT-238ENST00000626299 ABHD8Q96I13 439 aa16■□□□□ 0.15
SOX2-OT-238ENST00000626299 HOXC10Q9NYD6 342 aa16■□□□□ 0.15
SOX2-OT-238ENST00000626299 SRRDQ9UH36 339 aa16■□□□□ 0.15
SOX2-OT-238ENST00000626299 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
SOX2-OT-238ENST00000626299 SLC27A2O14975 620 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 BMP3P12645 472 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 PRKCZQ05513 592 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 NECTIN1Q15223 517 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 GMCL1Q96IK5 515 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 PORCNQ9H237 461 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 GABRQQ9UN88 632 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 ADAMTS5Q9UNA0 930 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 HPS5Q9UPZ3 1129 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 PTCH2Q9Y6C5 1203 aa15.99■□□□□ 0.15
SOX2-OT-238ENST00000626299 TNKSO95271 1327 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 A0A0G2JMZ2 1700 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 TNPO2O14787 897 aaKnown RBP15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 MCCP23508 829 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 SLC1A4P43007 532 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 CREB3L3Q68CJ9 461 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 DGKHQ86XP1 1220 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 MB21D1Q8N884 522 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 ENAHQ8N8S7 591 aaPredicted RBP15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 TTC14Q96N46 770 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 MTMR7Q9Y216 660 aa15.98■□□□□ 0.15
SOX2-OT-238ENST00000626299 VWA5AO00534 786 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 TRDNQ13061 729 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 RALYLQ86SE5 291 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 REPS2Q8NFH8 660 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 ANKS1AQ92625 1134 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 FEM1BQ9UK73 627 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 RLFQ13129 1914 aa15.97■□□□□ 0.15
SOX2-OT-238ENST00000626299 TMEM232C9JQI7 657 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 HOXD10P28358 340 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 MAPK4P31152 587 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 PRMT2P55345 433 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 ANTXR2P58335 489 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 TMEM132BQ14DG7 1078 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 GPR142Q7Z601 462 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 PRPF38AQ8NAV1 312 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 NCOA7Q8NI08 942 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 DCAF4Q8WV16 495 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 COA7Q96BR5 231 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 UBAC1Q9BSL1 405 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 MOV10L1Q9BXT6 1211 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 SPATC1LQ9H0A9 340 aa15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-238ENST00000626299 HTTP42858 3142 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 SNHG28P0DPA3 235 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 PDHBP11177 359 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 FLT3LGP49771 235 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 STAT2P52630 851 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 CCNA1P78396 465 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 SEC23AQ15436 765 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 CCDC96Q2M329 555 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 CHST3Q7LGC8 479 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 KIFC2Q96AC6 838 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 MYH4Q9Y623 1939 aa15.95■□□□□ 0.14
SOX2-OT-238ENST00000626299 FRMPD2Q68DX3 1309 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 PLS1Q14651 629 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 PLEKHH3Q7Z736 793 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 FAM160B2Q86V87 743 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 PNMA1Q8ND90 353 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 RAET1EQ8TD07 263 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 KAT14Q9H8E8 782 aa15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 ZNF214Q9UL59 606 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-238ENST00000626299 PLA2G6O60733 806 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 ERCC3P19447 782 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 ZNF543Q08ER8 600 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 IKQ13123 557 aaPredicted RBP15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 MORN1Q5T089 497 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 IFIT1BQ5T764 474 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 WDR78Q5VTH9 848 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 RNF20Q5VTR2 975 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 TTBK2Q6IQ55 1244 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 CCAR1Q8IX12 1150 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 SHCBP1Q8NEM2 672 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 SH3TC2Q8TF17 1288 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 CHURC1Q8WUH1 139 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 SLC38A10Q9HBR0 1119 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 GPCPD1Q9NPB8 672 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 PARP14Q460N5 1801 aa15.93■□□□□ 0.14
SOX2-OT-238ENST00000626299 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-238ENST00000626299 ZBED4O75132 1171 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms