RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 WDHD1O75717 1129 aaPredicted RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 IDH1O75874 414 aaKnown RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 TBC1D8O95759 1140 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 ZAP70P43403 619 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 RGS3P49796 1198 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 GTF2A2P52657 109 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 NFIAQ12857 509 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 VGLL4Q14135 290 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 NAA16Q6N069 864 aaPredicted RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 KDF1Q8NAX2 398 aaPredicted RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.78□□□□□ -1.16
TCF4-249ENST00000625716 IDI2Q9BXS1 227 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 TLR7Q9NYK1 1049 aaKnown RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 DBNLQ9UJU6 430 aaKnown RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 CDV3Q9UKY7 258 aaKnown RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 RPAP1Q9BWH6 1393 aaPredicted RBP7.78□□□□□ -1.16
TCF4-249ENST00000625716 SSC5DA1L4H1 1573 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 MYH13Q9UKX3 1938 aa7.78□□□□□ -1.16
TCF4-249ENST00000625716 CYP2E1P05181 493 aaPredicted RBP7.77□□□□□ -1.17
TCF4-249ENST00000625716 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
TCF4-249ENST00000625716 KRT76Q01546 638 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 PTSQ03393 145 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 MAP3K12Q12852 859 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 DGKZQ13574 1117 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 TTF1Q15361 905 aaPredicted RBP7.77□□□□□ -1.17
TCF4-249ENST00000625716 ERO1BQ86YB8 467 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 TEX11Q8IYF3 940 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 ZKSCAN4Q969J2 545 aaPredicted RBP7.77□□□□□ -1.17
TCF4-249ENST00000625716 LRRCC1Q9C099 1032 aa7.77□□□□□ -1.17
TCF4-249ENST00000625716 CCL15-CCL14A0A0B4J2E2 113 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 LILRA1O75019 489 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 CETPP11597 493 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 CYP7A1P22680 504 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 ADD1P35611 737 aaKnown RBP7.76□□□□□ -1.17
TCF4-249ENST00000625716 RRP1P56182 461 aaKnown RBP7.76□□□□□ -1.17
TCF4-249ENST00000625716 PPATQ06203 517 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 SNAPC2Q13487 334 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 CCL15Q16663 113 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.76□□□□□ -1.17
TCF4-249ENST00000625716 TMED8Q6PL24 325 aaPredicted RBP7.76□□□□□ -1.17
TCF4-249ENST00000625716 CERS3Q8IU89 383 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 ZFPM1Q8IX07 1006 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 SIRT2Q8IXJ6 389 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 DNAJC2Q99543 621 aaKnown RBP7.76□□□□□ -1.17
TCF4-249ENST00000625716 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 PIH1D3Q9NQM4 214 aaKnown RBP7.76□□□□□ -1.17
TCF4-249ENST00000625716 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
TCF4-249ENST00000625716 AATFQ9NY61 560 aaKnown RBP eCLIP7.76□□□□□ -1.17
TCF4-249ENST00000625716 DDTLA6NHG4 134 aaPredicted RBP7.75□□□□□ -1.17
TCF4-249ENST00000625716 ESPNB1AK53 854 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 GPR25O00155 361 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 FKTNO75072 461 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 INPP5BP32019 993 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 RHBDL3P58872 404 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 DHX9Q08211 1270 aaKnown RBP7.75□□□□□ -1.17
TCF4-249ENST00000625716 PPIL2Q13356 520 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 MAGEB6Q8N7X4 407 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 SH3RF3Q8TEJ3 882 aaPredicted RBP7.75□□□□□ -1.17
TCF4-249ENST00000625716 ZNF384Q8TF68 577 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.75□□□□□ -1.17
TCF4-249ENST00000625716 TGFBRAP1Q8WUH2 860 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 ABHD8Q96I13 439 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 GPATCH3Q96I76 525 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 INSM2Q96T92 566 aaPredicted RBP7.75□□□□□ -1.17
TCF4-249ENST00000625716 MCOLN1Q9GZU1 580 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 DHX36Q9H2U1 1008 aaKnown RBP7.75□□□□□ -1.17
TCF4-249ENST00000625716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.75□□□□□ -1.17
TCF4-249ENST00000625716 ZFYVE28Q9HCC9 887 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 DDX4Q9NQI0 724 aaKnown RBP7.75□□□□□ -1.17
TCF4-249ENST00000625716 ZNF112Q9UJU3 913 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
TCF4-249ENST00000625716 SLC35F4A4IF30 521 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 CCDC85CA6NKD9 419 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 ERVH48-1M5A8F1 160 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 IGF2BP3O00425 579 aaKnown RBP eCLIP7.74□□□□□ -1.17
TCF4-249ENST00000625716 GOLIM4O00461 696 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 CTNND1O60716 968 aaKnown RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 HLA-DOAP06340 250 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 USP5P45974 858 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 RELBQ01201 579 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 TAF1CQ15572 869 aaPredicted RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 NOM1Q5C9Z4 860 aaKnown RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 NOL9Q5SY16 702 aaKnown RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 SLC9C2Q5TAH2 1124 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 CTU1Q7Z7A3 348 aaKnown RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 MAPKAPK5Q8IW41 473 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 CRACR2BQ8N4Y2 399 aaPredicted RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 ZNF296Q8WUU4 475 aaPredicted RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 CFHR5Q9BXR6 569 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.74□□□□□ -1.172e-6■■■■□ 21
TCF4-249ENST00000625716 OSBPL5Q9H0X9 879 aaPredicted RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 ANTXR1Q9H6X2 564 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 ZNF395Q9H8N7 513 aaPredicted RBP7.74□□□□□ -1.17
TCF4-249ENST00000625716 PI4KBQ9UBF8 816 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 NDUFB9Q9Y6M9 179 aa7.74□□□□□ -1.17
TCF4-249ENST00000625716 CXCL11O14625 94 aa7.73□□□□□ -1.17
TCF4-249ENST00000625716 SMARCA5O60264 1052 aaPredicted RBP7.73□□□□□ -1.17
TCF4-249ENST00000625716 ATP5JP18859 108 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms