RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 GMCL1Q96IK5 515 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 PAGR1Q9BTK6 254 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 BTBD7Q9P203 1132 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 RABGAP1Q9Y3P9 1069 aa17.08■□□□□ 0.32
SOX2-OT-237ENST00000625581 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 COL9A3Q14050 684 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 KIF22Q14807 665 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 Q3C1V9 767 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 PPP1R9AQ9ULJ8 1098 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 ADAMTS5Q9UNA0 930 aa17.07■□□□□ 0.32
SOX2-OT-237ENST00000625581 TNKSO95271 1327 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 FCGRTP55899 365 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 PKN2Q16513 984 aaKnown RBP17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 DGKHQ86XP1 1220 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 REPS2Q8NFH8 660 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 TTC14Q96N46 770 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 ZSCAN10Q96SZ4 725 aaPredicted RBP17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 PORCNQ9H237 461 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 HOXC10Q9NYD6 342 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 PTPN22Q9Y2R2 807 aa17.06■□□□□ 0.32
SOX2-OT-237ENST00000625581 GNRH1P01148 92 aa17.05■□□□□ 0.32
SOX2-OT-237ENST00000625581 BMP3P12645 472 aa17.05■□□□□ 0.32
SOX2-OT-237ENST00000625581 ANTXR2P58335 489 aa17.05■□□□□ 0.32
SOX2-OT-237ENST00000625581 SEC23AQ15436 765 aa17.05■□□□□ 0.32
SOX2-OT-237ENST00000625581 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
SOX2-OT-237ENST00000625581 SLF1Q9BQI6 1058 aa17.05■□□□□ 0.32
SOX2-OT-237ENST00000625581 VWA5AO00534 786 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 MCCP23508 829 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 SLC1A4P43007 532 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 PRKCZQ05513 592 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 TRDNQ13061 729 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 ARHGEF6Q15052 776 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 SRRDQ9UH36 339 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 GABRQQ9UN88 632 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 PTCH2Q9Y6C5 1203 aa17.04■□□□□ 0.32
SOX2-OT-237ENST00000625581 BRCA2P51587 3418 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 SNHG28P0DPA3 235 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 PDHBP11177 359 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 CCDC178Q5BJE1 867 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 KCTD1Q719H9 257 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 FEM1BQ9UK73 627 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 HPS5Q9UPZ3 1129 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
SOX2-OT-237ENST00000625581 RBBP6Q7Z6E9 1792 aaKnown RBP17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 PLA2G6O60733 806 aa17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 CHST3Q7LGC8 479 aa17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 KCNB2Q92953 911 aa17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 MOV10L1Q9BXT6 1211 aaKnown RBP17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 SENP2Q9HC62 589 aa17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 ZNF214Q9UL59 606 aaPredicted RBP17.02■□□□□ 0.32
SOX2-OT-237ENST00000625581 ZNFX1Q9P2E3 1918 aaKnown RBP17.02■□□□□ 0.31
SOX2-OT-237ENST00000625581 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 REC8O95072 547 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 MAPK4P31152 587 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 STAT2P52630 851 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 PRMT2P55345 433 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 ZNF543Q08ER8 600 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 RNF20Q5VTR2 975 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 GPR142Q7Z601 462 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 PRPF38AQ8NAV1 312 aaKnown RBP17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 GJD2Q9UKL4 321 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 PLXNA1Q9UIW2 1896 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
SOX2-OT-237ENST00000625581 FRMPD2Q68DX3 1309 aaPredicted RBP17■□□□□ 0.31
SOX2-OT-237ENST00000625581 HOXD10P28358 340 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 HSPA4P34932 840 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 FLT3LGP49771 235 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 CCNA1P78396 465 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 IFIT1BQ5T764 474 aaKnown RBP17■□□□□ 0.31
SOX2-OT-237ENST00000625581 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 BTNL9Q6UXG8 535 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms