RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 JAG2Q9Y219 1238 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 N4BP3O15049 544 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
VARS2-213ENST00000625423 CNGA4Q8IV77 575 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 TAF1P21675 1872 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 SASH3O75995 380 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
VARS2-213ENST00000625423 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 MAPK8IP1Q9UQF2 711 aa12.74□□□□□ -0.37
VARS2-213ENST00000625423 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
VARS2-213ENST00000625423 KIF5CO60282 957 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 PAK1Q13153 545 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
VARS2-213ENST00000625423 RWDD2AQ9UIY3 292 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 RNF225M0QZC1 329 aaPredicted RBP12.73□□□□□ -0.37
VARS2-213ENST00000625423 ZNF569Q5MCW4 686 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 NELFBQ8WX92 580 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 RABGGTAQ92696 567 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.377e-6■■■■■ 33.4
VARS2-213ENST00000625423 ATP8A2Q9NTI2 1148 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
VARS2-213ENST00000625423 LAMB2P55268 1798 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 RPN1P04843 607 aaKnown RBP12.73□□□□□ -0.37
VARS2-213ENST00000625423 HIBADHP31937 336 aaKnown RBP12.73□□□□□ -0.37
VARS2-213ENST00000625423 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 LINC00116Q8NCU8 138 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 RASGRP4Q8TDF6 673 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 ITIH6Q6UXX5 1313 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 FAM205AQ6ZU69 1335 aa12.73□□□□□ -0.37
VARS2-213ENST00000625423 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 RPS8P62241 208 aaKnown RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 ERVK-24P63145 666 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 TBC1D9BQ66K14 1250 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 CCDC24Q8N4L8 307 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 ARPP21Q9UBL0 812 aaPredicted RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 POLR3GO15318 223 aaPredicted RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 ABL1P00519 1130 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 USP17L8P0C7I0 530 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 TCP11X2Q5H9J9 407 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 ZNF658Q5TYW1 1059 aaPredicted RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 C4orf32Q8N8J7 132 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 ABHD10Q9NUJ1 306 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 THRAP3Q9Y2W1 955 aaKnown RBP12.72□□□□□ -0.37
VARS2-213ENST00000625423 ERICH4A6NGS2 130 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 KCNJ18B7U540 433 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 KIF5BP33176 963 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 TXLNAP40222 546 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 KCNJ12Q14500 433 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 ARFGAP3Q9NP61 516 aa12.72□□□□□ -0.37
VARS2-213ENST00000625423 RREB1Q92766 1687 aa12.71□□□□□ -0.37
VARS2-213ENST00000625423 PRCPP42785 496 aa12.71□□□□□ -0.37
VARS2-213ENST00000625423 TFAP4Q01664 338 aa12.71□□□□□ -0.37
VARS2-213ENST00000625423 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
VARS2-213ENST00000625423 FECHP22830 423 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 CALML3P27482 149 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 LONP1P36776 959 aaKnown RBP12.71□□□□□ -0.38
VARS2-213ENST00000625423 STAT6P42226 847 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 SPAG1Q07617 926 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 KIF4BQ2VIQ3 1234 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 SBK1Q52WX2 424 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.38
VARS2-213ENST00000625423 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 TMTC1Q8IUR5 882 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.38
VARS2-213ENST00000625423 RMND1Q9NWS8 449 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 CDC23Q9UJX2 597 aa12.71□□□□□ -0.38
VARS2-213ENST00000625423 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.38
VARS2-213ENST00000625423 SLC35F6Q8N357 371 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 ANKRD20A12PQ8NF67 263 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 IL17RBQ9NRM6 502 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 SCN7AQ01118 1682 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 TRIM49BA6NDI0 452 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 PP2D1A8MPX8 630 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 TFRCP02786 760 aaKnown RBP12.7□□□□□ -0.38
VARS2-213ENST00000625423 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 DYNLL2Q96FJ2 89 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 MTMR7Q9Y216 660 aa12.7□□□□□ -0.38
VARS2-213ENST00000625423 DLEC1Q9Y238 1755 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms