RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TRIB2Q92519 343 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 FAM227BQ96M60 508 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 TBC1D32Q96NH3 1257 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 APBA2Q99767 749 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 SPATC1LQ9H0A9 340 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 IGKV6D-41A0A0C4DH26 115 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 HOXC6P09630 235 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 PPARAQ07869 468 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 GRB14Q14449 540 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 WDR78Q5VTH9 848 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 CWC27Q6UX04 472 aaKnown RBP14.97□□□□□ -0.01
PNKP-217ENST00000625216 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 MKL1Q969V6 931 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 HTATIP2Q9BUP3 242 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 MOV10L1Q9BXT6 1211 aaKnown RBP14.97□□□□□ -0.01
PNKP-217ENST00000625216 MROH8Q9H579 483 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 ADAMTS5Q9UNA0 930 aa14.97□□□□□ -0.01
PNKP-217ENST00000625216 RAD50Q92878 1312 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 F5H6K3 240 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 HIP1O00291 1037 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 FARP2O94887 1054 aaPredicted RBP14.96□□□□□ -0.01
PNKP-217ENST00000625216 SLC25A27O95847 323 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 KLRC3Q07444 240 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 ALX1Q15699 326 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 MCMDC2Q4G0Z9 681 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 ABRAQ8N0Z2 381 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 NEDD1Q8NHV4 660 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 ATG4CQ96DT6 458 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 MTMR4Q9NYA4 1195 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 CLIP2Q9UDT6 1046 aa14.96□□□□□ -0.01
PNKP-217ENST00000625216 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.02
PNKP-217ENST00000625216 PRDM1O75626 825 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 TTLL1O95922 423 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 TSPY3P0CV98 308 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 TSPY8P0CW00 308 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
PNKP-217ENST00000625216 ERCC3P19447 782 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 TRIM32Q13049 653 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 MFSD14CQ5VZR4 134 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 UPF2Q9HAU5 1272 aaKnown RBP14.95□□□□□ -0.02
PNKP-217ENST00000625216 SLC5A4Q9NY91 659 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 ANAPC4Q9UJX5 808 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 DOCK3Q8IZD9 2030 aa14.95□□□□□ -0.02
PNKP-217ENST00000625216 FOXP2O15409 715 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 RAD21O60216 631 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 REC8O95072 547 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 COPB2P35606 906 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 TFAP4Q01664 338 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
PNKP-217ENST00000625216 PLS1Q14651 629 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 CCL14Q16627 93 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 FAM83BQ5T0W9 1011 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 CCDC129Q6ZRS4 1044 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 DPP9Q86TI2 863 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 RUFY2Q8WXA3 655 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 USP26Q9BXU7 913 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 C22orf23Q9BZE7 217 aa14.94□□□□□ -0.02
PNKP-217ENST00000625216 VWA5AO00534 786 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 EIF5BO60841 1220 aaKnown RBP14.93□□□□□ -0.02
PNKP-217ENST00000625216 NDUFB10O96000 172 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 RBM25P49756 843 aaKnown RBP14.93□□□□□ -0.02
PNKP-217ENST00000625216 TMEM132BQ14DG7 1078 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 NECAB2Q7Z6G3 386 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 ZNF589Q86UQ0 364 aaPredicted RBP14.93□□□□□ -0.02
PNKP-217ENST00000625216 NCAPG2Q86XI2 1143 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 RIOX2Q8IUF8 465 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 PRPF38AQ8NAV1 312 aaKnown RBP14.93□□□□□ -0.02
PNKP-217ENST00000625216 GMCL1P1Q8NEA9 526 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 DPF3Q92784 378 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 LSG1Q9H089 658 aaKnown RBP14.93□□□□□ -0.02
PNKP-217ENST00000625216 FBXO28Q9NVF7 368 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 OGDHLQ9ULD0 1010 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
PNKP-217ENST00000625216 LAMA4Q16363 1823 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 PLIN4Q96Q06 1357 aa14.93□□□□□ -0.02
PNKP-217ENST00000625216 FGAP02671 866 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 FGRP09769 529 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 FCER1AP12319 257 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 ADORA2AP29274 412 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 STAT3P40763 770 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 VPS53Q5VIR6 699 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 OLFML2BQ68BL8 750 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
PNKP-217ENST00000625216 SLF1Q9BQI6 1058 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 ANO2Q9NQ90 1003 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 NR2E3Q9Y5X4 410 aa14.92□□□□□ -0.02
PNKP-217ENST00000625216 TSPY2A6NKD2 308 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 ORC4O43929 436 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 MSCO60682 206 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 IGHA2P01877 340 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 FDX1P10109 184 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 HSPD1P10809 573 aaKnown RBP14.91□□□□□ -0.02
PNKP-217ENST00000625216 PTH1RQ03431 593 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 FAM47AQ5JRC9 791 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 NPLOC4Q8TAT6 608 aa14.91□□□□□ -0.02
PNKP-217ENST00000625216 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms