RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 TMEM132BQ14DG7 1078 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 LRRC26Q2I0M4 334 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 SBK1Q52WX2 424 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 ANO1Q5XXA6 986 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
USH1C-211ENST00000624811 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
USH1C-211ENST00000624811 GOPCQ9HD26 462 aa16.43■□□□□ 0.22
USH1C-211ENST00000624811 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
USH1C-211ENST00000624811 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
USH1C-211ENST00000624811 PRDM1O75626 825 aa16.42■□□□□ 0.22
USH1C-211ENST00000624811 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
USH1C-211ENST00000624811 PRAMEF19Q5SWL8 479 aa16.42■□□□□ 0.22
USH1C-211ENST00000624811 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
USH1C-211ENST00000624811 SENP6Q9GZR1 1112 aaPredicted RBP16.42■□□□□ 0.22
USH1C-211ENST00000624811 MROH8Q9H579 483 aa16.42■□□□□ 0.22
USH1C-211ENST00000624811 ZFYP08048 801 aaPredicted RBP16.41■□□□□ 0.22
USH1C-211ENST00000624811 CYBAP13498 195 aa16.41■□□□□ 0.22
USH1C-211ENST00000624811 MAGEA10P43363 369 aaPredicted RBP16.41■□□□□ 0.22
USH1C-211ENST00000624811 ATN1P54259 1190 aaPredicted RBP16.41■□□□□ 0.22
USH1C-211ENST00000624811 LRCH3Q96II8 777 aa16.41■□□□□ 0.22
USH1C-211ENST00000624811 GDF15Q99988 308 aa16.41■□□□□ 0.22
USH1C-211ENST00000624811 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
USH1C-211ENST00000624811 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
USH1C-211ENST00000624811 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
USH1C-211ENST00000624811 ROBO3Q96MS0 1386 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 ERC2O15083 957 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 PGK2P07205 417 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 FCER1AP12319 257 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
USH1C-211ENST00000624811 GJC2Q5T442 439 aaPredicted RBP16.4■□□□□ 0.22
USH1C-211ENST00000624811 OLFML2BQ68BL8 750 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 PI4K2BQ8TCG2 481 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 CRBNQ96SW2 442 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 MMP19Q99542 508 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 SLC5A4Q9NY91 659 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 CLIP2Q9UDT6 1046 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
USH1C-211ENST00000624811 VWA5AO00534 786 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 MSCO60682 206 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 SLC25A27O95847 323 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 IGHA2P01877 340 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 GNAT2P19087 354 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 STAT3P40763 770 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 IFNL3Q8IZI9 196 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.21
USH1C-211ENST00000624811 MAML3Q96JK9 1138 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 ADAMTS5Q9UNA0 930 aa16.39■□□□□ 0.21
USH1C-211ENST00000624811 A0A1W2PPC1 479 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
USH1C-211ENST00000624811 F5H6K3 240 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 NDUFB10O96000 172 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 MX1P20591 662 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 MDM2Q00987 491 aaPredicted RBP16.38■□□□□ 0.21
USH1C-211ENST00000624811 KLRC3Q07444 240 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
USH1C-211ENST00000624811 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 LRRC47Q8N1G4 583 aaKnown RBP16.38■□□□□ 0.21
USH1C-211ENST00000624811 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 UBE2OQ9C0C9 1292 aaKnown RBP16.38■□□□□ 0.21
USH1C-211ENST00000624811 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
USH1C-211ENST00000624811 DNM1LO00429 736 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 BMP8BP34820 402 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 KCTD2Q14681 263 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 REPS2Q8NFH8 660 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 CEP95Q96GE4 821 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
USH1C-211ENST00000624811 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
USH1C-211ENST00000624811 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
USH1C-211ENST00000624811 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
USH1C-211ENST00000624811 SEPT4O43236 478 aa16.36■□□□□ 0.21
USH1C-211ENST00000624811 ANKRD45Q5TZF3 282 aa16.36■□□□□ 0.21
USH1C-211ENST00000624811 SNRNP48Q6IEG0 339 aaKnown RBP16.36■□□□□ 0.21
USH1C-211ENST00000624811 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
USH1C-211ENST00000624811 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
USH1C-211ENST00000624811 NAPBQ9H115 298 aa16.36■□□□□ 0.21
USH1C-211ENST00000624811 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
USH1C-211ENST00000624811 MCM3APO60318 1980 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 KBTBD13C9JR72 458 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 RTP1P59025 263 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 PPARAQ07869 468 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 ARRDC4Q8NCT1 418 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 FERMT2Q96AC1 680 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 RIPK3Q9Y572 518 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
USH1C-211ENST00000624811 LTBP2Q14767 1821 aa16.35■□□□□ 0.21
USH1C-211ENST00000624811 TSPY3P0CV98 308 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 TSPY8P0CW00 308 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 TAL1P17542 331 aaPredicted RBP16.34■□□□□ 0.21
USH1C-211ENST00000624811 TFAP4Q01664 338 aa16.34■□□□□ 0.21
USH1C-211ENST00000624811 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms