RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 SHMT1P34896 483 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 FKBP1CQ5VVH2 108 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 PPP1R18Q6NYC8 613 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 RSBN1LQ6PCB5 846 aaPredicted RBP18.69■□□□□ 0.58
LDB3-208ENST00000623007 SHC4Q6S5L8 630 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 LARGE2Q8N3Y3 721 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 OXER1Q8TDS5 423 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 GLT8D2Q9H1C3 349 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 RIOX1Q9H6W3 641 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 SCN9AQ15858 1988 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 CCDC194A0A1B0GVG4 234 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 TPM4P67936 248 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 NPY5RQ15761 445 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 STAG2Q8N3U4 1231 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 AGBL3Q8NEM8 1001 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 ZMYND12Q9H0C1 365 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 NYAP2Q9P242 653 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 PCDHB6Q9Y5E3 794 aa18.69■□□□□ 0.58
LDB3-208ENST00000623007 BECN2A8MW95 431 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 ESPNB1AK53 854 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 PDHBP11177 359 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 TATDN1Q6P1N9 297 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 KRT25Q7Z3Z0 450 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.68■□□□□ 0.58
LDB3-208ENST00000623007 ZSCAN30Q86W11 494 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 CNNM3Q8NE01 707 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 MKL1Q969V6 931 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 MXD3Q9BW11 206 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 CBX8Q9HC52 389 aa18.68■□□□□ 0.58
LDB3-208ENST00000623007 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
LDB3-208ENST00000623007 HERC5Q9UII4 1024 aaKnown RBP18.68■□□□□ 0.58
LDB3-208ENST00000623007 AKR1B1P15121 316 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 DPEP1P16444 411 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 ATP2C1P98194 919 aaPredicted RBP18.67■□□□□ 0.58
LDB3-208ENST00000623007 CFAP100Q494V2 611 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 CERKLQ49MI3 558 aaPredicted RBP18.67■□□□□ 0.58
LDB3-208ENST00000623007 TMEM179Q6ZVK1 233 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 TEX2Q8IWB9 1127 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 NIM1KQ8IY84 436 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 MTMR14Q8NCE2 650 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 ZNRF3Q9ULT6 936 aa18.67■□□□□ 0.58
LDB3-208ENST00000623007 STXBP3O00186 592 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 MYO1BO43795 1136 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 PTMAP06454 111 aaKnown RBP18.66■□□□□ 0.58
LDB3-208ENST00000623007 MSNP26038 577 aaKnown RBP18.66■□□□□ 0.58
LDB3-208ENST00000623007 KRBA2Q6ZNG9 492 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 HEATR3Q7Z4Q2 680 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 ZSCAN29Q8IWY8 852 aaPredicted RBP18.66■□□□□ 0.58
LDB3-208ENST00000623007 TRIML1Q8N9V2 468 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 DCAF4Q8WV16 495 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 SMTNL1A8MU46 457 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 CYTH3O43739 400 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 ADCY5O95622 1261 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 KCNA3P22001 575 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 NAPAP54920 295 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 NLRP12P59046 1061 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 CT47A1Q5JQC4 288 aaPredicted RBP18.66■□□□□ 0.58
LDB3-208ENST00000623007 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 DNAJC25Q9H1X3 360 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 DACH1Q9UI36 760 aa18.66■□□□□ 0.58
LDB3-208ENST00000623007 hCG_1642624A0A1W2PR95 340 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 YDJCA8MPS7 323 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 M0R2N6 131 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 TXLNAP40222 546 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 NFIAQ12857 509 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 MCTP2Q6DN12 878 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 PIK3AP1Q6ZUJ8 805 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 SHISA4Q96DD7 197 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 KCNQ5Q9NR82 932 aa18.65■□□□□ 0.58
LDB3-208ENST00000623007 MPHOSPH10O00566 681 aaKnown RBP18.64■□□□□ 0.57
LDB3-208ENST00000623007 LONP1P36776 959 aaKnown RBP18.64■□□□□ 0.57
LDB3-208ENST00000623007 TRAF1Q13077 416 aa18.64■□□□□ 0.57
LDB3-208ENST00000623007 DHX8Q14562 1220 aaKnown RBP18.64■□□□□ 0.57
LDB3-208ENST00000623007 DLGAP5Q15398 846 aa18.64■□□□□ 0.57
LDB3-208ENST00000623007 DALRD3Q5D0E6 543 aaKnown RBP18.64■□□□□ 0.57
LDB3-208ENST00000623007 SARM1Q6SZW1 724 aa18.64■□□□□ 0.57
LDB3-208ENST00000623007 ADAMTSL1Q8N6G6 1762 aa18.64■□□□□ 0.57
LDB3-208ENST00000623007 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 PRPHP41219 470 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 SEMA3FQ13275 785 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 USP17L2Q6R6M4 530 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 CLIC6Q96NY7 704 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 GMLQ99445 158 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 PNMA6FA0A0J9YX94 578 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 USP17L5A8MUK1 530 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 SMC2O95347 1197 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 FAM151AQ8WW52 585 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 NAP1L4Q99733 375 aaKnown RBP18.63■□□□□ 0.57
LDB3-208ENST00000623007 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
LDB3-208ENST00000623007 MYH4Q9Y623 1939 aa18.62■□□□□ 0.57
LDB3-208ENST00000623007 IKBKBO14920 756 aa18.62■□□□□ 0.57
LDB3-208ENST00000623007 ATP2B1P20020 1258 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms