RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 PORCNQ9H237 461 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 IL17RBQ9NRM6 502 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 CTDP1Q9Y5B0 961 aaPredicted RBP16.49■□□□□ 0.23
PCDHGC3-208ENST00000622836 CNMDO75829 334 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 GRK4P32298 578 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 PTH1RQ03431 593 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 IKQ13123 557 aaPredicted RBP16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 POTEEQ6S8J3 1075 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 KRT23Q9C075 422 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 IVNS1ABPQ9Y6Y0 642 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 HTTP42858 3142 aa16.48■□□□□ 0.23
PCDHGC3-208ENST00000622836 ADCY3O60266 1144 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 KDM4AO75164 1064 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 BMP3P12645 472 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 SLC1A4P43007 532 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 PLEKHH3Q7Z736 793 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 SLAIN1Q8ND83 568 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 NUDT12Q9BQG2 462 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 SPATC1LQ9H0A9 340 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 PPP1R9AQ9ULJ8 1098 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 LAMA4Q16363 1823 aa16.47■□□□□ 0.23
PCDHGC3-208ENST00000622836 B4E1Z4 1266 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 ELNP15502 786 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 MCCP23508 829 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 NT5C2P49902 561 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 UBXN2AP68543 259 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 TRDNQ13061 729 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 IRF5Q13568 498 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 KIFC2Q96AC6 838 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 ZKSCAN3Q9BRR0 538 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 FEM1BQ9UK73 627 aa16.46■□□□□ 0.23
PCDHGC3-208ENST00000622836 DOCK3Q8IZD9 2030 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 VWA5AO00534 786 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 CDC45O75419 566 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 TOP1P11387 765 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 CYP2B6P20813 491 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 CCDC96Q2M329 555 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 CCDC178Q5BJE1 867 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 NCAPG2Q86XI2 1143 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 MOV10L1Q9BXT6 1211 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 ANO2Q9NQ90 1003 aa16.45■□□□□ 0.22
PCDHGC3-208ENST00000622836 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 ZBED4O75132 1171 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 CYP21A2P08686 494 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 RGS2P41220 211 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 SLC4A3P48751 1232 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 STAT2P52630 851 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 TMEM132BQ14DG7 1078 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 PXYLP1Q8TE99 480 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 TTC14Q96N46 770 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 TMEM47Q9BQJ4 181 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 UBAC1Q9BSL1 405 aa16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 RBM8AQ9Y5S9 174 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-208ENST00000622836 RLFQ13129 1914 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 ERCC3P19447 782 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 STAT3P40763 770 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 RALYLQ86SE5 291 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 MAP4K1Q92918 833 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 MROH8Q9H579 483 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 ADAMTS5Q9UNA0 930 aa16.43■□□□□ 0.22
PCDHGC3-208ENST00000622836 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 CENPFP49454 3210 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 SLC15A5A6NIM6 579 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 SLC25A27O95847 323 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 INHAP05111 366 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 PTPREP23469 700 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 NOVP48745 357 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 RCSD1Q6JBY9 416 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 FAM160B2Q86V87 743 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 ZSCAN10Q96SZ4 725 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 APBA2Q99767 749 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 KAT14Q9H8E8 782 aa16.42■□□□□ 0.22
PCDHGC3-208ENST00000622836 ZSWIM5Q9P217 1185 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms