RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 ARPP21Q9UBL0 812 aaPredicted RBP5.33□□□□□ -1.56
LINC00649-219ENST00000622171 MORF4L1Q9UBU8 362 aa5.33□□□□□ -1.56
LINC00649-219ENST00000622171 CLIP2Q9UDT6 1046 aa5.33□□□□□ -1.56
LINC00649-219ENST00000622171 GJD2Q9UKL4 321 aa5.33□□□□□ -1.56
LINC00649-219ENST00000622171 SLC45A1Q9Y2W3 748 aa5.33□□□□□ -1.56
LINC00649-219ENST00000622171 NEDD4P46934 1319 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 FRMPD2Q68DX3 1309 aaPredicted RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 RANBP6O60518 1105 aaKnown RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 COBLO75128 1261 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 HMGCRP04035 888 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 TSPY3P0CV98 308 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 TSPY8P0CW00 308 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 ADORA2AP29274 412 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 HOXA7P31268 230 aaPredicted RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 ATN1P54259 1190 aaPredicted RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 USP14P54578 494 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 TFAP4Q01664 338 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 CACNB2Q08289 660 aaPredicted RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 HDAC1Q13547 482 aaPredicted RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 TMEM132BQ14DG7 1078 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 CCDC96Q2M329 555 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 PRPF38BQ5VTL8 546 aaKnown RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 CCDC174Q6PII3 467 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 CWC27Q6UX04 472 aaKnown RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 CHD1LQ86WJ1 897 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 PLEKHM2Q8IWE5 1019 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 PPP1R13LQ8WUF5 828 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 C12orf42Q96LP6 360 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 NUDT12Q9BQG2 462 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 NBPF3Q9H094 633 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 SPATC1LQ9H0A9 340 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 RAVER2Q9HCJ3 691 aaKnown RBP5.32□□□□□ -1.56
LINC00649-219ENST00000622171 SWAP70Q9UH65 585 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 KIAA1217Q5T5P2 1943 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 GBF1Q92538 1859 aa5.32□□□□□ -1.56
LINC00649-219ENST00000622171 SCN5AQ14524 2016 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 CCDC171Q6TFL3 1326 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 TSPY2A6NKD2 308 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 GJB1P08034 283 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 MCCP23508 829 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 DSG3P32926 999 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 SLC16A2P36021 539 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 RGS2P41220 211 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 GJA8P48165 433 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 NUCB1Q02818 461 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 MAP2K5Q13163 448 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 MORN1Q5T089 497 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
LINC00649-219ENST00000622171 SLFN13Q68D06 897 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 SNRNP48Q6IEG0 339 aaKnown RBP5.31□□□□□ -1.56
LINC00649-219ENST00000622171 TTBK2Q6IQ55 1244 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 CERS3Q8IU89 383 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 FERMT2Q96AC1 680 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 PURBQ96QR8 312 aaKnown RBP5.31□□□□□ -1.56
LINC00649-219ENST00000622171 APBA2Q99767 749 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 TBC1D2Q9BYX2 928 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 RWDD1Q9H446 243 aaPredicted RBP5.31□□□□□ -1.56
LINC00649-219ENST00000622171 GOPCQ9HD26 462 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 GPCPD1Q9NPB8 672 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 DIAPH3Q9NSV4 1193 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 STX8Q9UNK0 236 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 COLQQ9Y215 455 aaPredicted RBP5.31□□□□□ -1.56
LINC00649-219ENST00000622171 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 RABGAP1Q9Y3P9 1069 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 RIPK3Q9Y572 518 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 TAF6LQ9Y6J9 622 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 IVNS1ABPQ9Y6Y0 642 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 EYSQ5T1H1 3165 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 CDH23Q9H251 3354 aa5.31□□□□□ -1.56
LINC00649-219ENST00000622171 TRIP12Q14669 1992 aaPredicted RBP5.31□□□□□ -1.56
LINC00649-219ENST00000622171 PFASO15067 1338 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 IGKV6D-41A0A0C4DH26 115 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 PATL2C9JE40 543 aaKnown RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 TMEM232C9JQI7 657 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 F5H6K3 240 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 WDR46O15213 610 aaKnown RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 SGPL1O95470 568 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 GNRH1P01148 92 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 FGAP02671 866 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 ZFYP08048 801 aaPredicted RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 GOLGA8HP0CJ92 632 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 HSPD1P10809 573 aaKnown RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 SDSP20132 328 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 PTPREP23469 700 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 MAPK4P31152 587 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 MNX1P50219 401 aaPredicted RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 PRMT2P55345 433 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 KLRC3Q07444 240 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 IRF5Q13568 498 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 COL9A3Q14050 684 aaPredicted RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 GRB14Q14449 540 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 COG2Q14746 738 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 SBK1Q52WX2 424 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 LBX2Q6XYB7 198 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 DPP9Q86TI2 863 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 RAB11FIP4Q86YS3 637 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 SMC5Q8IY18 1101 aa5.3□□□□□ -1.56
LINC00649-219ENST00000622171 ZNF444Q8N0Y2 327 aaPredicted RBP5.3□□□□□ -1.56
LINC00649-219ENST00000622171 SOCS4Q8WXH5 440 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms