RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GALNT17Q6IS24 598 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 RSRC2Q7L4I2 434 aaKnown RBP10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 BLIDQ8IZY5 108 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 IGSF22Q8N9C0 903 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 TUBB2BQ9BVA1 445 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 TCP11L1Q9NUJ3 509 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 ARGLU1Q9NWB6 273 aaPredicted RBP10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 RMND1Q9NWS8 449 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 MKRN1Q9UHC7 482 aaKnown RBP10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 MRFAP1Q9Y605 127 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 ADGRG1Q9Y653 693 aa10.9□□□□□ -0.66
IGHV3-54-201ENST00000622166 M0R2N6 131 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 KLRK1P26718 216 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 GTF2E1P29083 439 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 TM4SF1P30408 202 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 STX17P56962 302 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 PPP4CP60510 307 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 EVX2Q03828 476 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 RBL2Q08999 1139 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 TRIM14Q14142 442 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 FAM47AQ5JRC9 791 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 ZNF658Q5TYW1 1059 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 RAD9BQ6WBX8 426 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 PIK3AP1Q6ZUJ8 805 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 RASGRP2Q7LDG7 609 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 CNGA4Q8IV77 575 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 GPR161Q8N6U8 529 aaKnown RBP10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 WDR24Q96S15 920 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 PCDHA4Q9UN74 947 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 CTNND2Q9UQB3 1225 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 FHOD1Q9Y613 1164 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 NAV1Q8NEY1 1877 aa10.89□□□□□ -0.67
IGHV3-54-201ENST00000622166 TSPY2A6NKD2 308 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 NMT2O60551 498 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 RPN1P04843 607 aaKnown RBP10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 CASP1P29466 404 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 PRDX5P30044 214 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 COPB1P53618 953 aaKnown RBP10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 PPP2R3AQ06190 1150 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 KCNB1Q14721 858 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 KRT31Q15323 416 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 RRAGBQ5VZM2 374 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 KLHL10Q6JEL2 608 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 C15orf52Q6ZUT6 534 aaKnown RBP10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 TMTC1Q8IUR5 882 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 WDR66Q8TBY9 1149 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 RABGGTAQ92696 567 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 SETDB2Q96T68 719 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 MTRQ99707 1265 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 KAT14Q9H8E8 782 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 TFCP2L1Q9NZI6 479 aa10.88□□□□□ -0.67
IGHV3-54-201ENST00000622166 SOWAHDA6NJG2 315 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 H7C1D1 291 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 ADAMTS3O15072 1205 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 NPHP1O15259 732 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 MYL1P05976 194 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 USP17L8P0C7I0 530 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 PNMA6AP0CW24 399 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 VEGFAP15692 232 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 MCM7P33993 719 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TXLNAP40222 546 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 PRPHP41219 470 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TUBB4BP68371 445 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 GSTO1P78417 241 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TFAP4Q01664 338 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 PAK1Q13153 545 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 MTF1Q14872 753 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TERF2Q15554 542 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TMCO3Q6UWJ1 677 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 BICDL1Q6ZP65 573 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 NBPF5PQ86XG9 351 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 LZTS2Q9BRK4 669 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 CCSER1Q9C0I3 900 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 IL17RBQ9NRM6 502 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
IGHV3-54-201ENST00000622166 FAM205AQ6ZU69 1335 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 BTAF1O14981 1849 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 TNRC6CQ9HCJ0 1690 aaKnown RBP10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 LAD1O00515 517 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 GYPCP04921 128 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 LDHCP07864 332 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 CASP14P31944 242 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 PLA2G4AP47712 749 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 TCP11X2Q5H9J9 407 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 JAKMIP3Q5VZ66 844 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 CERS3Q8IU89 383 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 SMYD4Q8IYR2 804 aaPredicted RBP10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 ANKRD20A12PQ8NF67 263 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 CCDC148Q8NFR7 591 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 NELFBQ8WX92 580 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms