RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TEX11Q8IYF3 940 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 TMTC2Q8N394 836 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 CCDC112Q8NEF3 446 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 PRMT6Q96LA8 375 aaPredicted RBP19.97■□□□□ 0.79
FAM3A-222ENST00000621967 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
FAM3A-222ENST00000621967 LAMB1P07942 1786 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 GUCY1A2P33402 732 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 TOB1P50616 345 aaPredicted RBP19.96■□□□□ 0.79
FAM3A-222ENST00000621967 CDC42EP5Q6NZY7 148 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 ARMCX5Q6P1M9 558 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 KRBA2Q6ZNG9 492 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 TRIM22Q8IYM9 498 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 KRI1Q8N9T8 703 aaKnown RBP19.96■□□□□ 0.79
FAM3A-222ENST00000621967 FOXP1Q9H334 677 aaPredicted RBP19.96■□□□□ 0.79
FAM3A-222ENST00000621967 HACL1Q9UJ83 578 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 RHBDL3P58872 404 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 FANCCQ00597 558 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 PNOCQ13519 176 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 TMC6Q7Z403 805 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 DIS3L2Q8IYB7 885 aaKnown RBP19.96■□□□□ 0.79
FAM3A-222ENST00000621967 STK11IPQ8N1F8 1099 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 PDCL2Q8N4E4 241 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 TDRD3Q9H7E2 651 aaKnown RBP19.96■□□□□ 0.79
FAM3A-222ENST00000621967 TMOD2Q9NZR1 351 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 ANAPC4Q9UJX5 808 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 KCNH3Q9ULD8 1083 aa19.96■□□□□ 0.79
FAM3A-222ENST00000621967 CCDC196A0A1B0GTZ2 297 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 IQCA1LA6NCM1 817 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 BTBD18B2RXH4 712 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 WNT10BO00744 389 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 DEXIO95424 95 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 EGFRP00533 1210 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 USP5P45974 858 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 MYL5Q02045 173 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 SAFBQ15424 915 aaKnown RBP eCLIP19.95■□□□□ 0.78
FAM3A-222ENST00000621967 LONRF3Q496Y0 759 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 CRACR2BQ8N4Y2 399 aaPredicted RBP19.95■□□□□ 0.78
FAM3A-222ENST00000621967 SDR42E1Q8WUS8 393 aa19.95■□□□□ 0.78
FAM3A-222ENST00000621967 ADARB2Q9NS39 739 aaKnown RBP19.95■□□□□ 0.78
FAM3A-222ENST00000621967 ERICH2A1L162 156 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 KIF2AO00139 706 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-222ENST00000621967 PPARAQ07869 468 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 NBPF9Q3BBW0 867 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 RILPL1Q5EBL4 403 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 RRP12Q5JTH9 1297 aaKnown RBP19.94■□□□□ 0.78
FAM3A-222ENST00000621967 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 ZKSCAN3Q9BRR0 538 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 CLRN2A0PK11 232 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 PTPREP23469 700 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 MDM2Q00987 491 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-222ENST00000621967 ZNF654Q8IZM8 581 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 TGFBRAP1Q8WUH2 860 aa19.94■□□□□ 0.78
FAM3A-222ENST00000621967 ZBED3Q96IU2 234 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-222ENST00000621967 FBXO2Q9UK22 296 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-222ENST00000621967 WDR90Q96KV7 1748 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 SCN4AP35499 1836 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 SFPQP23246 707 aaKnown RBP eCLIP19.93■□□□□ 0.78
FAM3A-222ENST00000621967 SEC23AQ15436 765 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 ISM2Q6H9L7 571 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 FOXP4Q8IVH2 680 aaPredicted RBP19.93■□□□□ 0.78
FAM3A-222ENST00000621967 FANCBQ8NB91 859 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 CNNM3Q8NE01 707 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 VEZTQ9HBM0 779 aa19.93■□□□□ 0.78
FAM3A-222ENST00000621967 ATP1A3P13637 1013 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 CACNB3P54284 484 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 PICALMQ13492 652 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 PPP2R5BQ15173 497 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 SPDYE2Q495Y8 402 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 E4F1Q66K89 784 aaPredicted RBP19.92■□□□□ 0.78
FAM3A-222ENST00000621967 ZNF579Q8NAF0 562 aaKnown RBP19.92■□□□□ 0.78
FAM3A-222ENST00000621967 TOMM22Q9NS69 142 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 ATP8A2Q9NTI2 1148 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 KCNJ14Q9UNX9 436 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 MORC2Q9Y6X9 1032 aaPredicted RBP19.92■□□□□ 0.78
FAM3A-222ENST00000621967 EPHX2P34913 555 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 PPP4R3BQ5MIZ7 849 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 MAPKAPK5Q8IW41 473 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 ZNF70Q9UC06 446 aaPredicted RBP19.92■□□□□ 0.78
FAM3A-222ENST00000621967 PCDHA5Q9Y5H7 936 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 CDK5RAP2Q96SN8 1893 aa19.92■□□□□ 0.78
FAM3A-222ENST00000621967 FLT1P17948 1338 aa19.91■□□□□ 0.78
FAM3A-222ENST00000621967 CBFA2T2O43439 604 aa19.91■□□□□ 0.78
FAM3A-222ENST00000621967 NT5DC1Q5TFE4 455 aa19.91■□□□□ 0.78
FAM3A-222ENST00000621967 ARID3AQ99856 593 aa19.91■□□□□ 0.78
FAM3A-222ENST00000621967 TRMT1Q9NXH9 659 aaKnown RBP19.91■□□□□ 0.78
FAM3A-222ENST00000621967 TAOK2Q9UL54 1235 aa19.91■□□□□ 0.78
FAM3A-222ENST00000621967 NFIAQ12857 509 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 ZNF526Q8TF50 670 aaPredicted RBP19.9■□□□□ 0.78
FAM3A-222ENST00000621967 ZNF592Q92610 1267 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 UBAC1Q9BSL1 405 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 RNF26Q9BY78 433 aaPredicted RBP19.9■□□□□ 0.78
FAM3A-222ENST00000621967 DCP1AQ9NPI6 582 aaPredicted RBP19.9■□□□□ 0.78
FAM3A-222ENST00000621967 HOOK1Q9UJC3 728 aaKnown RBP19.9■□□□□ 0.78
FAM3A-222ENST00000621967 NAV1Q8NEY1 1877 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 TNKSO95271 1327 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 FOCADQ5VW36 1801 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 BMP6P22004 513 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 USP50Q70EL3 339 aaPredicted RBP19.9■□□□□ 0.78
FAM3A-222ENST00000621967 ESR2Q92731 530 aa19.9■□□□□ 0.78
FAM3A-222ENST00000621967 IDI2Q9BXS1 227 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms