RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 CDK8P49336 464 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 C12orf60Q5U649 245 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
TARDBP-225ENST00000621715 BADQ92934 168 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 LENG1Q96BZ8 264 aaPredicted RBP20.23■□□□□ 0.83
TARDBP-225ENST00000621715 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 PRDM5Q9NQX1 630 aaPredicted RBP20.23■□□□□ 0.83
TARDBP-225ENST00000621715 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 ADAMTS5Q9UNA0 930 aa20.23■□□□□ 0.83
TARDBP-225ENST00000621715 MIER1Q8N108 512 aa20.22■□□□□ 0.83
TARDBP-225ENST00000621715 MB21D1Q8N884 522 aa20.22■□□□□ 0.83
TARDBP-225ENST00000621715 ARRDC4Q8NCT1 418 aa20.22■□□□□ 0.83
TARDBP-225ENST00000621715 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.22■□□□□ 0.83
TARDBP-225ENST00000621715 MROH8Q9H579 483 aa20.22■□□□□ 0.83
TARDBP-225ENST00000621715 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
TARDBP-225ENST00000621715 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 USP17L21D6R901 530 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
TARDBP-225ENST00000621715 EEF2P13639 858 aaKnown RBP20.21■□□□□ 0.83
TARDBP-225ENST00000621715 HSP90AB4PQ58FF6 505 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 ABRAQ8N0Z2 381 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 REPS2Q8NFH8 660 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 ZBTB40Q9NUA8 1239 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 MUC3AQ02505 3323 aa20.21■□□□□ 0.83
TARDBP-225ENST00000621715 KBTBD13C9JR72 458 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 WDR46O15213 610 aaKnown RBP20.2■□□□□ 0.82
TARDBP-225ENST00000621715 EPHB4P54760 987 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 C16orf86Q6ZW13 317 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.2■□□□□ 0.82
TARDBP-225ENST00000621715 ARHGEF10LQ9HCE6 1279 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 ATP8A2Q9NTI2 1148 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
TARDBP-225ENST00000621715 PGK1P00558 417 aa20.19■□□□□ 0.82
TARDBP-225ENST00000621715 FCER1AP12319 257 aa20.19■□□□□ 0.82
TARDBP-225ENST00000621715 ATP5JP18859 108 aa20.19■□□□□ 0.82
TARDBP-225ENST00000621715 ZNF792Q3KQV3 632 aa20.19■□□□□ 0.82
TARDBP-225ENST00000621715 CDX2Q99626 313 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-225ENST00000621715 HAUS7Q99871 368 aa20.19■□□□□ 0.82
TARDBP-225ENST00000621715 PUS7LQ9H0K6 701 aaKnown RBP20.19■□□□□ 0.82
TARDBP-225ENST00000621715 TTYH1Q9H313 450 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-225ENST00000621715 PRKAG2Q9UGJ0 569 aa20.19■□□□□ 0.82
TARDBP-225ENST00000621715 ZNF214Q9UL59 606 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-225ENST00000621715 TLE2Q04725 743 aa20.18■□□□□ 0.82
TARDBP-225ENST00000621715 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
TARDBP-225ENST00000621715 MMP19Q99542 508 aa20.18■□□□□ 0.82
TARDBP-225ENST00000621715 NUP88Q99567 741 aaPredicted RBP20.18■□□□□ 0.82
TARDBP-225ENST00000621715 PHF24Q9UPV7 400 aa20.18■□□□□ 0.82
TARDBP-225ENST00000621715 VWA5AO00534 786 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
TARDBP-225ENST00000621715 FAM83BQ5T0W9 1011 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 ZNF697Q5TEC3 545 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 C1orf53Q5VUE5 145 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 RIOX2Q8IUF8 465 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 RPAP2Q8IXW5 612 aaPredicted RBP20.17■□□□□ 0.82
TARDBP-225ENST00000621715 CCDC17Q96LX7 622 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 SEMA6BQ9H3T3 888 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 XPNPEP3Q9NQH7 507 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 MCM3APO60318 1980 aa20.17■□□□□ 0.82
TARDBP-225ENST00000621715 CHD9Q3L8U1 2897 aa20.16■□□□□ 0.82
TARDBP-225ENST00000621715 IRX5P78411 483 aaPredicted RBP20.16■□□□□ 0.82
TARDBP-225ENST00000621715 TINF2Q9BSI4 451 aa20.16■□□□□ 0.82
TARDBP-225ENST00000621715 RIPK3Q9Y572 518 aa20.16■□□□□ 0.82
TARDBP-225ENST00000621715 SLC4A4Q9Y6R1 1079 aa20.16■□□□□ 0.82
TARDBP-225ENST00000621715 SMARCA5O60264 1052 aaPredicted RBP20.15■□□□□ 0.82
TARDBP-225ENST00000621715 SLC25A27O95847 323 aa20.15■□□□□ 0.82
TARDBP-225ENST00000621715 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
TARDBP-225ENST00000621715 STK11IPQ8N1F8 1099 aa20.15■□□□□ 0.82
TARDBP-225ENST00000621715 SH2D4AQ9H788 454 aa20.15■□□□□ 0.82
TARDBP-225ENST00000621715 SLC5A4Q9NY91 659 aa20.15■□□□□ 0.82
TARDBP-225ENST00000621715 ROBO3Q96MS0 1386 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 A0A1W2PQ45 241 aaPredicted RBP20.14■□□□□ 0.81
TARDBP-225ENST00000621715 A0A1W2PQY0 241 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 RAB11FIP3O75154 756 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 STAT3P40763 770 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 KANSL2Q9H9L4 492 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 MYH4Q9Y623 1939 aa20.14■□□□□ 0.81
TARDBP-225ENST00000621715 MYADML2A6NDP7 307 aa20.13■□□□□ 0.81
TARDBP-225ENST00000621715 ADCY6O43306 1168 aa20.13■□□□□ 0.81
TARDBP-225ENST00000621715 RAD21O60216 631 aa20.13■□□□□ 0.81
TARDBP-225ENST00000621715 RARBP10826 455 aa20.13■□□□□ 0.81
TARDBP-225ENST00000621715 RASA1P20936 1047 aa20.13■□□□□ 0.81
TARDBP-225ENST00000621715 TTC28Q96AY4 2481 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 PQBP1O60828 265 aaKnown RBP20.12■□□□□ 0.81
TARDBP-225ENST00000621715 HMMRO75330 724 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 SNAI1O95863 264 aaPredicted RBP20.12■□□□□ 0.81
TARDBP-225ENST00000621715 CLTBP09497 229 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
TARDBP-225ENST00000621715 KCTD2Q14681 263 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 FGD4Q96M96 766 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 STRBPQ96SI9 672 aaKnown RBP20.12■□□□□ 0.81
TARDBP-225ENST00000621715 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.12■□□□□ 0.812e-12■□□□□ 8.7
TARDBP-225ENST00000621715 NRBP1Q9UHY1 535 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 DDX19BQ9UMR2 479 aa20.12■□□□□ 0.81
TARDBP-225ENST00000621715 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
TARDBP-225ENST00000621715 SYNRGQ9UMZ2 1314 aa20.11■□□□□ 0.81
TARDBP-225ENST00000621715 GSG1L2A8MUP6 293 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms