RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SENP2Q9HC62 589 aa16.85■□□□□ 0.29
CBWD3-217ENST00000621474 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
CBWD3-217ENST00000621474 CNMDO75829 334 aa16.84■□□□□ 0.29
CBWD3-217ENST00000621474 SP3Q02447 781 aa16.84■□□□□ 0.29
CBWD3-217ENST00000621474 GMCL1Q96IK5 515 aa16.84■□□□□ 0.29
CBWD3-217ENST00000621474 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
CBWD3-217ENST00000621474 FKTNO75072 461 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 FLOT1O75955 427 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 MCCP23508 829 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 COG2Q14746 738 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 IGDCC4Q8TDY8 1250 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 UBAC1Q9BSL1 405 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 MORF4L1Q9UBU8 362 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 ADAMTS5Q9UNA0 930 aa16.83■□□□□ 0.28
CBWD3-217ENST00000621474 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
CBWD3-217ENST00000621474 PDHBP11177 359 aa16.82■□□□□ 0.28
CBWD3-217ENST00000621474 DSG3P32926 999 aa16.82■□□□□ 0.28
CBWD3-217ENST00000621474 GCLCP48506 637 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-217ENST00000621474 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-217ENST00000621474 Q3C1V9 767 aa16.82■□□□□ 0.28
CBWD3-217ENST00000621474 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-217ENST00000621474 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
CBWD3-217ENST00000621474 BMP3P12645 472 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-217ENST00000621474 SLC1A4P43007 532 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 CCDC178Q5BJE1 867 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 KCTD1Q719H9 257 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 PNMA1Q8ND90 353 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 CD99L2Q8TCZ2 262 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 ATG4CQ96DT6 458 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
CBWD3-217ENST00000621474 PLXNB2O15031 1838 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 PRC1O43663 620 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 MCM5P33992 734 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 EXOSC10Q01780 885 aaKnown RBP16.81■□□□□ 0.28
CBWD3-217ENST00000621474 LY9Q9HBG7 655 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
CBWD3-217ENST00000621474 CPA1P15085 419 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 ERVK-9P63128 1117 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 ERVK-24P63145 666 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 KRT32Q14532 448 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 IFIT1BQ5T764 474 aaKnown RBP16.8■□□□□ 0.28
CBWD3-217ENST00000621474 COL13A1Q5TAT6 717 aaPredicted RBP16.8■□□□□ 0.28
CBWD3-217ENST00000621474 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 HOXC10Q9NYD6 342 aa16.8■□□□□ 0.28
CBWD3-217ENST00000621474 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 SH2B2O14492 632 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-217ENST00000621474 GTF3C2Q8WUA4 911 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-217ENST00000621474 DCAF4Q8WV16 495 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 PAGR1Q9BTK6 254 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 KAT14Q9H8E8 782 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 RABGAP1Q9Y3P9 1069 aa16.79■□□□□ 0.28
CBWD3-217ENST00000621474 FRMPD2Q68DX3 1309 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 VWA5AO00534 786 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 ECM2O94769 699 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 STAT2P52630 851 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 WTAPQ15007 396 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 PORCNQ9H237 461 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 FEM1BQ9UK73 627 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 WDR19Q8NEZ3 1342 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 PLA2G6O60733 806 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 TROAPQ12815 778 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 TMEM132BQ14DG7 1078 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 BTNL9Q6UXG8 535 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 OTOP1Q7RTM1 612 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 GPRC5AQ8NFJ5 357 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 TMEM87BQ96K49 555 aa16.78■□□□□ 0.28
CBWD3-217ENST00000621474 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-217ENST00000621474 ERICH2A1L162 156 aa16.77■□□□□ 0.27
CBWD3-217ENST00000621474 GOLGA8HP0CJ92 632 aa16.77■□□□□ 0.27
CBWD3-217ENST00000621474 LIFRP42702 1097 aa16.77■□□□□ 0.27
CBWD3-217ENST00000621474 SART3Q15020 963 aaKnown RBP16.77■□□□□ 0.27
CBWD3-217ENST00000621474 MB21D1Q8N884 522 aa16.77■□□□□ 0.27
CBWD3-217ENST00000621474 KIFC2Q96AC6 838 aa16.77■□□□□ 0.27
CBWD3-217ENST00000621474 IL17RAQ96F46 866 aa16.77■□□□□ 0.27
CBWD3-217ENST00000621474 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.27
CBWD3-217ENST00000621474 SLC16A2P36021 539 aa16.76■□□□□ 0.27
CBWD3-217ENST00000621474 PSMC4P43686 418 aa16.76■□□□□ 0.27
CBWD3-217ENST00000621474 CCDC96Q2M329 555 aa16.76■□□□□ 0.27
CBWD3-217ENST00000621474 SPATC1LQ9H0A9 340 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms