RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
TP53-226ENST00000620739 CCDC183Q5T5S1 534 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 DGKHQ86XP1 1220 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 CKAP2LQ8IYA6 745 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
TP53-226ENST00000620739 ZDHHC15Q96MV8 337 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
TP53-226ENST00000620739 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
TP53-226ENST00000620739 SCAF8Q9UPN6 1271 aaKnown RBP13.03□□□□□ -0.32
TP53-226ENST00000620739 DDAH1O94760 285 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 AKR1B1P15121 316 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 POLD1P28340 1107 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
TP53-226ENST00000620739 FAM198AQ9UFP1 575 aa13.03□□□□□ -0.32
TP53-226ENST00000620739 PSMD14O00487 310 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.32
TP53-226ENST00000620739 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.32
TP53-226ENST00000620739 GABPAQ06546 454 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.32
TP53-226ENST00000620739 SYAP1Q96A49 352 aaPredicted RBP13.02□□□□□ -0.32
TP53-226ENST00000620739 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.32
TP53-226ENST00000620739 RTEL1Q9NZ71 1219 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 COL4A5P29400 1685 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 STK36Q9NRP7 1315 aa13.02□□□□□ -0.32
TP53-226ENST00000620739 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.33
TP53-226ENST00000620739 TOB1P50616 345 aaPredicted RBP13.02□□□□□ -0.33
TP53-226ENST00000620739 RCAN1P53805 252 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 MTA1Q13330 715 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 IRF5Q13568 498 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 BRAPQ7Z569 592 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
TP53-226ENST00000620739 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.33
TP53-226ENST00000620739 PIK3R5Q8WYR1 880 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 DNAJC18Q9H819 358 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.33
TP53-226ENST00000620739 A0A1B0GVL5 298 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 CYTH3O43739 400 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 STK38Q15208 465 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 ANO1Q5XXA6 986 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 NEDD1Q8NHV4 660 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 CNTNAP5Q8WYK1 1306 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 CLRN2A0PK11 232 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
TP53-226ENST00000620739 CALM1P0DP23 149 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 CALM2P0DP24 149 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 CALM3P0DP25 149 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 ANKRD23Q86SG2 305 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 NOSTRINQ8IVI9 506 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 GPKOWQ92917 476 aaPredicted RBP eCLIP13.01□□□□□ -0.33
TP53-226ENST00000620739 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
TP53-226ENST00000620739 A0A087WWV3 80 aa13□□□□□ -0.33
TP53-226ENST00000620739 CCDC189A1A4V9 331 aa13□□□□□ -0.33
TP53-226ENST00000620739 WNT7AO00755 349 aa13□□□□□ -0.33
TP53-226ENST00000620739 SPTLC2O15270 562 aa13□□□□□ -0.33
TP53-226ENST00000620739 SHMT1P34896 483 aa13□□□□□ -0.33
TP53-226ENST00000620739 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
TP53-226ENST00000620739 LRRC47Q8N1G4 583 aaKnown RBP13□□□□□ -0.33
TP53-226ENST00000620739 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
TP53-226ENST00000620739 WASF1Q92558 559 aa13□□□□□ -0.33
TP53-226ENST00000620739 CLIC6Q96NY7 704 aa13□□□□□ -0.33
TP53-226ENST00000620739 MTFR1LQ9H019 292 aa13□□□□□ -0.33
TP53-226ENST00000620739 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
TP53-226ENST00000620739 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
TP53-226ENST00000620739 SNW1Q13573 536 aaKnown RBP13□□□□□ -0.33
TP53-226ENST00000620739 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
TP53-226ENST00000620739 SPECC1Q5M775 1068 aa13□□□□□ -0.33
TP53-226ENST00000620739 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
TP53-226ENST00000620739 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
TP53-226ENST00000620739 ANKS1AQ92625 1134 aa13□□□□□ -0.33
TP53-226ENST00000620739 MAP3K14Q99558 947 aa13□□□□□ -0.33
TP53-226ENST00000620739 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
TP53-226ENST00000620739 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
TP53-226ENST00000620739 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
TP53-226ENST00000620739 RSPH14Q9UHP6 348 aa13□□□□□ -0.33
TP53-226ENST00000620739 DDX60LQ5H9U9 1706 aaKnown RBP13□□□□□ -0.33
TP53-226ENST00000620739 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 TRIM66O15016 1216 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 PPP2R5BQ15173 497 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 NPY5RQ15761 445 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 NUP62CLQ9H1M0 184 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 BCS1LQ9Y276 419 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 LAMB1P07942 1786 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 USP17L5A8MUK1 530 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
TP53-226ENST00000620739 NDUFA8P51970 172 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms