RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CCDC114Q96M63 670 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 PCDHA7Q9UN72 937 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 SPDYE3A6NKU9 549 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 PYGBP11216 843 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 FERP16591 822 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 CFAP100Q494V2 611 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 RNF187Q5TA31 235 aaPredicted RBP11.62□□□□□ -0.55
VPS11-207ENST00000620429 CCDC181Q5TID7 509 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 TBC1D5Q92609 795 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 ALS2CR12Q96Q35 445 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 METTL22Q9BUU2 404 aaPredicted RBP11.62□□□□□ -0.55
VPS11-207ENST00000620429 EPN3Q9H201 632 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 NCOA5Q9HCD5 579 aaKnown RBP11.62□□□□□ -0.55
VPS11-207ENST00000620429 RTEL1Q9NZ71 1219 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 UTYO14607 1347 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
VPS11-207ENST00000620429 SERPINC1P01008 464 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 PAPOLAP51003 745 aaKnown RBP11.61□□□□□ -0.55
VPS11-207ENST00000620429 DNAJC14Q6Y2X3 702 aaPredicted RBP11.61□□□□□ -0.55
VPS11-207ENST00000620429 STOX1Q6ZVD7 989 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 ZCRB1Q8TBF4 217 aaKnown RBP11.61□□□□□ -0.55
VPS11-207ENST00000620429 ZFAND2BQ8WV99 257 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 NDUFA8P51970 172 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 XRCC4Q13426 336 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 MCMDC2Q4G0Z9 681 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 CRELD2Q6UXH1 353 aaPredicted RBP11.61□□□□□ -0.55
VPS11-207ENST00000620429 DHX32Q7L7V1 743 aaKnown RBP11.61□□□□□ -0.55
VPS11-207ENST00000620429 SDCCAG8Q86SQ7 713 aaPredicted RBP11.61□□□□□ -0.55
VPS11-207ENST00000620429 NSMCE1Q8WV22 266 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 NEDD4P46934 1319 aa11.61□□□□□ -0.55
VPS11-207ENST00000620429 ZNF609O15014 1411 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 OPA1O60313 960 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 ECEL1O95672 775 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 NEXNQ0ZGT2 675 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 ACCSLQ4AC99 568 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 EMC10Q5UCC4 262 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 NBPF15Q8N660 670 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 FAM81AQ8TBF8 368 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 ZNF473Q8WTR7 871 aaKnown RBP11.6□□□□□ -0.55
VPS11-207ENST00000620429 NUP133Q8WUM0 1156 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 EPAS1Q99814 870 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 DBNLQ9UJU6 430 aaKnown RBP11.6□□□□□ -0.55
VPS11-207ENST00000620429 STK38Q15208 465 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 ADALQ6DHV7 355 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 MTHFD1LQ6UB35 978 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 NAPGQ99747 312 aaPredicted RBP11.6□□□□□ -0.55
VPS11-207ENST00000620429 DESI2Q9BSY9 194 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 SELENOOQ9BVL4 669 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS11-207ENST00000620429 TSGA10Q9BZW7 698 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 MRC1P22897 1456 aa11.6□□□□□ -0.55
VPS11-207ENST00000620429 A0A1W2PQ27 194 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 A0A1W2PQ64 194 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 A0A1W2PQD8 194 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 TMEM232C9JQI7 657 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 A1BGP04217 495 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 ZNF569Q5MCW4 686 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 TSHZ1Q6ZSZ6 1077 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 DDX46Q7L014 1031 aaKnown RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 CAMKK2Q96RR4 588 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 FANCLQ9NW38 375 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 HOOK1Q9UJC3 728 aaKnown RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 COL5A2P05997 1499 aaPredicted RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 A6NHS1 94 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 SLC3A2P08195 630 aaKnown RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 AMPD2Q01433 879 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 FAM98CQ17RN3 349 aaKnown RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 ARHGAP22Q7Z5H3 698 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 SLX1AQ9BQ83 275 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■■■ 92.6
VPS11-207ENST00000620429 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 LSP1P33241 339 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 AKAP17AQ02040 695 aaKnown RBP11.59□□□□□ -0.55
VPS11-207ENST00000620429 MYL5Q02045 173 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 PDCLQ13371 301 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 CCDC121Q6ZUS5 278 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 ATL2Q8NHH9 583 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 YIPF3Q9GZM5 350 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 LZTFL1Q9NQ48 299 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
VPS11-207ENST00000620429 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
VPS11-207ENST00000620429 SBF2Q86WG5 1849 aa11.58□□□□□ -0.55
VPS11-207ENST00000620429 PKD1L3Q7Z443 1732 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 PDLIM1O00151 329 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 LINGO3P0C6S8 592 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 TFCP2Q12800 502 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 IFT88Q13099 833 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 CCHCR1Q8TD31 782 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms