RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 CYP7A1P22680 504 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 PRAMEF19Q5SWL8 479 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 USP17L2Q6R6M4 530 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 CERS3Q8IU89 383 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 PPM1EQ8WY54 764 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 BTBD7Q9P203 1132 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 FLT1P17948 1338 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 ZNF532Q9HCE3 1301 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 MYH4Q9Y623 1939 aa10.97□□□□□ -0.65
SYN3-213ENST00000619146 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 PTPREP23469 700 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
SYN3-213ENST00000619146 SLC39A5Q6ZMH5 540 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 USP38Q8NB14 1042 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 ACER1Q8TDN7 264 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 LPAR1Q92633 364 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 OSBP2Q969R2 916 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 ANO2Q9NQ90 1003 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 IVNS1ABPQ9Y6Y0 642 aa10.96□□□□□ -0.65
SYN3-213ENST00000619146 DNM1LO00429 736 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 SEC24BO95487 1268 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 BAG3O95817 575 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 GNAT2P19087 354 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 COL9A1P20849 921 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 MCCP23508 829 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 ADCYAP1R1P41586 468 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 DHX36Q9H2U1 1008 aaKnown RBP10.95□□□□□ -0.66
SYN3-213ENST00000619146 RABGAP1Q9Y3P9 1069 aa10.95□□□□□ -0.66
SYN3-213ENST00000619146 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 TRIM43BA6NCK2 446 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 SLC15A5A6NIM6 579 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 KBTBD13C9JR72 458 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 GPAA1O43292 621 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 PLCG2P16885 1265 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 ITGB8P26012 769 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 EPHB4P54760 987 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 CCNA1P78396 465 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 DPP9Q86TI2 863 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 MIGA1Q8NAN2 632 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 TRIM43Q96BQ3 446 aaPredicted RBP10.94□□□□□ -0.66
SYN3-213ENST00000619146 DSCC1Q9BVC3 393 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 USP26Q9BXU7 913 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 PUS7LQ9H0K6 701 aaKnown RBP10.94□□□□□ -0.66
SYN3-213ENST00000619146 PDLIM7Q9NR12 457 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 CTNNA3Q9UI47 895 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 CHD7Q9P2D1 2997 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
SYN3-213ENST00000619146 M0R2C6 588 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 MBD4O95243 580 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 CHGBP05060 677 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 HLA-DOAP06340 250 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 CYBAP13498 195 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 VCAM1P19320 739 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 PPP4CP60510 307 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 EVX2Q03828 476 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 GRB14Q14449 540 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 PLS1Q14651 629 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 GRIN2CQ14957 1233 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 CATSPERGQ6ZRH7 1159 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 FOXP4Q8IVH2 680 aaPredicted RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 RNPC3Q96LT9 517 aaKnown RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 STRBPQ96SI9 672 aaKnown RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 C22orf23Q9BZE7 217 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 NACAP1Q9BZK3 213 aa10.93□□□□□ -0.66
SYN3-213ENST00000619146 LSG1Q9H089 658 aaKnown RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 RPAP3Q9H6T3 665 aaPredicted RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
SYN3-213ENST00000619146 TRANK1O15050 2925 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 SPDYE16A6NNV3 312 aaPredicted RBP10.92□□□□□ -0.66
SYN3-213ENST00000619146 ADORA2AP29274 412 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 USP5P45974 858 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 RBM25P49756 843 aaKnown RBP10.92□□□□□ -0.66
SYN3-213ENST00000619146 TLE2Q04725 743 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 FAM47AQ5JRC9 791 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 RNF20Q5VTR2 975 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 CCDC129Q6ZRS4 1044 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 ARRDC4Q8NCT1 418 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
SYN3-213ENST00000619146 MAP4K1Q92918 833 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 LENG1Q96BZ8 264 aaPredicted RBP10.92□□□□□ -0.66
SYN3-213ENST00000619146 DDRGK1Q96HY6 314 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 CRNKL1Q9BZJ0 848 aaKnown RBP10.92□□□□□ -0.66
SYN3-213ENST00000619146 IL25Q9H293 177 aa10.92□□□□□ -0.66
SYN3-213ENST00000619146 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
SYN3-213ENST00000619146 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms