RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 GLTPD2A6NH11 291 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 FLT3P36888 993 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 IMMTQ16891 758 aaKnown RBP13.77□□□□□ -0.2
SRRT-216ENST00000618262 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.2
SRRT-216ENST00000618262 NAIF1Q69YI7 327 aaPredicted RBP13.77□□□□□ -0.2
SRRT-216ENST00000618262 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 SPATA32Q96LK8 384 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 IRF2BPLQ9H1B7 796 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 PCDHGA4Q9Y5G9 962 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 SYNRGQ9UMZ2 1314 aa13.77□□□□□ -0.2
SRRT-216ENST00000618262 GAKO14976 1311 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 MYO1BO43795 1136 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 HSPA4P34932 840 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 NEDD4P46934 1319 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 MCTP2Q6DN12 878 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 VPS33BQ9H267 617 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 BAZ2AQ9UIF9 1905 aaKnown RBP13.77□□□□□ -0.21
SRRT-216ENST00000618262 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.21
SRRT-216ENST00000618262 ZKSCAN1P17029 563 aaPredicted RBP13.77□□□□□ -0.21
SRRT-216ENST00000618262 PPARAQ07869 468 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 RASA3Q14644 834 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 SH3BP5LQ7L8J4 393 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 TATDN2Q93075 761 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 CSRNP1Q96S65 589 aa13.77□□□□□ -0.21
SRRT-216ENST00000618262 ANKRD62A6NC57 917 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 E7EWF7 191 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 EPHX2P34913 555 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 IRF5Q13568 498 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 ZNF446Q9NWS9 450 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 TMOD2Q9NZR1 351 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 SBF1O95248 1867 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 MYO3BQ8WXR4 1341 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 GDF11O95390 407 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 RXRAP19793 462 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 STK3Q13188 491 aa13.76□□□□□ -0.21
SRRT-216ENST00000618262 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
SRRT-216ENST00000618262 CRACR2BQ8N4Y2 399 aaPredicted RBP13.76□□□□□ -0.21
SRRT-216ENST00000618262 TMCO5BA8MYB1 307 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 POTECB2RU33 542 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 ZNF662Q6ZS27 426 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
SRRT-216ENST00000618262 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
SRRT-216ENST00000618262 TRAF5O00463 557 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 ADCY2Q08462 1091 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 NBPF12Q5TAG4 269 aaPredicted RBP13.75□□□□□ -0.21
SRRT-216ENST00000618262 MOB2Q70IA6 237 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 DEFB129Q9H1M3 183 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 SENP2Q9HC62 589 aa13.75□□□□□ -0.21
SRRT-216ENST00000618262 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
SRRT-216ENST00000618262 TRAF1Q13077 416 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
SRRT-216ENST00000618262 OSBPL5Q9H0X9 879 aaPredicted RBP13.74□□□□□ -0.21
SRRT-216ENST00000618262 TPX2Q9ULW0 747 aaKnown RBP13.74□□□□□ -0.21
SRRT-216ENST00000618262 CREB3O43889 395 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
SRRT-216ENST00000618262 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
SRRT-216ENST00000618262 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 BRCA2P51587 3418 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 PPP4CP60510 307 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 RASGRP2Q7LDG7 609 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 DPF2Q92785 391 aa13.74□□□□□ -0.21
SRRT-216ENST00000618262 MYH7P12883 1935 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 MYBL2P10244 700 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 GNAT2P19087 354 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 RNF20Q5VTR2 975 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 CEP89Q96ST8 783 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.73□□□□□ -0.21
SRRT-216ENST00000618262 CTIFO43310 598 aaKnown RBP13.73□□□□□ -0.21
SRRT-216ENST00000618262 INF2Q27J81 1249 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 CYB5R4Q7L1T6 521 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
SRRT-216ENST00000618262 MYLK4Q86YV6 388 aaPredicted RBP13.73□□□□□ -0.21
SRRT-216ENST00000618262 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 ATP8A2Q9NTI2 1148 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 RABL2BQ9UNT1 228 aa13.73□□□□□ -0.21
SRRT-216ENST00000618262 PLCG2P16885 1265 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 RPS12P25398 132 aaKnown RBP13.72□□□□□ -0.21
SRRT-216ENST00000618262 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
SRRT-216ENST00000618262 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
SRRT-216ENST00000618262 DOCK2Q92608 1830 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
SRRT-216ENST00000618262 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 TXLNBQ8N3L3 684 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 ADARB2Q9NS39 739 aaKnown RBP13.72□□□□□ -0.21
SRRT-216ENST00000618262 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
SRRT-216ENST00000618262 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms