RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MYL5Q02045 173 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
CIITA-212ENST00000618207 NLGN1Q8N2Q7 840 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 ZNF592Q92610 1267 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 TNFRSF25Q93038 417 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 BLZF1Q9H2G9 400 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 DDX4Q9NQI0 724 aaKnown RBP14.15□□□□□ -0.14
CIITA-212ENST00000618207 ATP6V0A2Q9Y487 856 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 PARP3Q9Y6F1 533 aa14.15□□□□□ -0.14
CIITA-212ENST00000618207 FAM237AA0A1B0GTK4 181 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 FAM196BA6NMK8 535 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 USP27XA6NNY8 438 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 ACTN4O43707 911 aaKnown RBP14.14□□□□□ -0.15
CIITA-212ENST00000618207 TCP10Q12799 353 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 INF2Q27J81 1249 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 KIAA0825Q8IV33 1275 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 HSD3B7Q9H2F3 369 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 HOOK1Q9UJC3 728 aaKnown RBP14.14□□□□□ -0.15
CIITA-212ENST00000618207 MAST2Q6P0Q8 1798 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 RBM5P52756 815 aaKnown RBP eCLIP14.14□□□□□ -0.15
CIITA-212ENST00000618207 UBASH3AP57075 661 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 FMR1Q06787 632 aaKnown RBP eCLIP14.14□□□□□ -0.15
CIITA-212ENST00000618207 GRM4Q14833 912 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 TPD52L1Q16890 204 aaPredicted RBP14.14□□□□□ -0.15
CIITA-212ENST00000618207 TBC1D22AQ8WUA7 517 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 SPTLC3Q9NUV7 552 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 NAV1Q8NEY1 1877 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 CDK11BP21127 795 aaKnown RBP14.14□□□□□ -0.15
CIITA-212ENST00000618207 C16orf86Q6ZW13 317 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 TMX4Q9H1E5 349 aaPredicted RBP14.14□□□□□ -0.15
CIITA-212ENST00000618207 USP40Q9NVE5 1235 aa14.14□□□□□ -0.15
CIITA-212ENST00000618207 MYH1P12882 1939 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 TMEM232C9JQI7 657 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
CIITA-212ENST00000618207 PLCG2P16885 1265 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 CDC25BP30305 580 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 CREBRFQ8IUR6 639 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 RASSF8Q8NHQ8 419 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 CDK5RAP2Q96SN8 1893 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 PP2D1A8MPX8 630 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 CHRNA5P30532 468 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 NAPAP54920 295 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 IL17AQ16552 155 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 SLF2Q8IX21 1173 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 BPIFA3Q9BQP9 254 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 ZNF287Q9HBT7 754 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 NFE2L3Q9Y4A8 694 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 DLEC1Q9Y238 1755 aa14.13□□□□□ -0.15
CIITA-212ENST00000618207 TPM2P07951 284 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 PARP1P09874 1014 aaKnown RBP14.12□□□□□ -0.15
CIITA-212ENST00000618207 NPR1P16066 1061 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
CIITA-212ENST00000618207 COA1Q9GZY4 146 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 GPCPD1Q9NPB8 672 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 AKR1B1P15121 316 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 NFIAQ12857 509 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 HOMEZQ8IX15 550 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 PIGSQ96S52 555 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 SAMSN1Q9NSI8 373 aaKnown RBP14.12□□□□□ -0.15
CIITA-212ENST00000618207 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
CIITA-212ENST00000618207 SNED1Q8TER0 1413 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 ATP2C1P98194 919 aaPredicted RBP14.11□□□□□ -0.15
CIITA-212ENST00000618207 PAGE5Q96GU1 130 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 MAPK8IP1Q9UQF2 711 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 CALML3P27482 149 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 KARSQ15046 597 aaKnown RBP14.11□□□□□ -0.15
CIITA-212ENST00000618207 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
CIITA-212ENST00000618207 ZFPM1Q8IX07 1006 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 NEDD1Q8NHV4 660 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 ANKRD31Q8N7Z5 1873 aa14.11□□□□□ -0.15
CIITA-212ENST00000618207 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
CIITA-212ENST00000618207 PALM3A6NDB9 673 aaPredicted RBP14.1□□□□□ -0.15
CIITA-212ENST00000618207 IKBKBO14920 756 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 TNNT1P13805 278 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 GNAQP50148 359 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 CCZ1BP86790 482 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 CCZ1P86791 482 aaPredicted RBP14.1□□□□□ -0.15
CIITA-212ENST00000618207 LETM2Q2VYF4 491 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 JAKMIP3Q5VZ66 844 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 ARMCX5Q6P1M9 558 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 FERMT2Q96AC1 680 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 TMEM60Q9H2L4 133 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 PCDHA6Q9UN73 950 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 GAKO14976 1311 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 ZSCAN29Q8IWY8 852 aaPredicted RBP14.1□□□□□ -0.15
CIITA-212ENST00000618207 COA7Q96BR5 231 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 UIMC1Q96RL1 719 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 BIN2Q9UBW5 565 aaPredicted RBP14.1□□□□□ -0.15
CIITA-212ENST00000618207 SMCO2A6NFE2 343 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 STXBP3O00186 592 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 SLFN14P0C7P3 912 aa14.1□□□□□ -0.15
CIITA-212ENST00000618207 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms