RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ANAPC5Q9UJX4 755 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 CEP104O60308 925 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 FLAD1Q8NFF5 587 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 RAB20Q9NX57 234 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 SMC5Q8IY18 1101 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 NLRP12P59046 1061 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 TIMM10P62072 90 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 RAD51AP2Q09MP3 1159 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 RBBP5Q15291 538 aaKnown RBP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 OTUD7BQ6GQQ9 843 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 SLC17A8Q8NDX2 589 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 OGFRQ9NZT2 677 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 TROVE2P10155 538 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 PRKG1Q13976 671 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 GADL1Q6ZQY3 521 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 CABP7Q86V35 215 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 RPS6KC1Q96S38 1066 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 CLCN1P35523 988 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 SDCCAG3Q96C92 435 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 PIK3C2GO75747 1445 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 ZNF449Q6P9G9 518 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 PDE6CP51160 858 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 FANCCQ00597 558 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 PPP1R12CQ9BZL4 782 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 GPR162Q16538 588 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 VPS37BQ9H9H4 285 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 SLC52A2Q9HAB3 445 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 VAMP4O75379 141 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 S100BP04271 92 aaPredicted RBP12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 PTPREP23469 700 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 PRR16Q569H4 304 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 DYMQ7RTS9 669 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 RNF169Q8NCN4 708 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 SEPT10Q9P0V9 454 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 A0A1W2PP64 1363 aa12.28□□□□□ -0.44
CCDC144B-208ENST00000618081 NXNQ6DKJ4 435 aa12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 ZNF532Q9HCE3 1301 aa12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 POLGP54098 1239 aaPredicted RBP12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 KRBA2Q6ZNG9 492 aa12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.44
CCDC144B-208ENST00000618081 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 ZMYM4Q5VZL5 1548 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM160B1Q5W0V3 765 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 EYA1Q99502 592 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 HESX1Q9UBX0 185 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 SULF1Q8IWU6 871 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 SCYL1Q96KG9 808 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 ARHGAP6O43182 974 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 KBTBD3Q8NAB2 608 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 TXNDC9O14530 226 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 TAF5LO75529 589 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 INPP5BP32019 993 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 RFC1P35251 1148 aaPredicted RBP12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 ARHGAP44Q17R89 818 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 DIS3L2Q8IYB7 885 aaKnown RBP12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 PHKBQ93100 1093 aa12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.45
CCDC144B-208ENST00000618081 CTDSPL2Q05D32 466 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 RGS16O15492 202 aaPredicted RBP12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 GPBP1Q86WP2 473 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 CTAGE3PQ8IX95 158 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 SMCO2A6NFE2 343 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 SRGAP2BP0DMP2 458 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 PIK3CAP42336 1068 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 CYP2J2P51589 502 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 TRIM58Q8NG06 486 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 TTC1Q99614 292 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 PCDHA12Q9UN75 941 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 GARSP41250 739 aaKnown RBP12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 CTSWP56202 376 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 DBN1Q16643 649 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 LONRF2Q1L5Z9 754 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 ANKRD35Q8N283 1001 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 XPOTO43592 962 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms