RNA–Protein interactions for RNA: ENST00000617806.4

BECN1-222, Transcript of beclin 1, humanhuman

TSL 5

Gene BECN1, Length 4,865 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-222ENST00000617806 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
BECN1-222ENST00000617806 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.42
BECN1-222ENST00000617806 B4DLN1 442 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 M0R2C6 588 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 UBL4BQ8N7F7 174 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
BECN1-222ENST00000617806 ST7Q9NRC1 585 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 RIPOR2Q9Y4F9 1068 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 RGS16O15492 202 aaPredicted RBP12.4□□□□□ -0.42
BECN1-222ENST00000617806 ADORA1P30542 326 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 SARNPP82979 210 aaKnown RBP12.4□□□□□ -0.42
BECN1-222ENST00000617806 TOGARAM2Q6ZUX3 1019 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 IQCDQ96DY2 449 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 LSM14BQ9BX40 385 aaKnown RBP12.4□□□□□ -0.42
BECN1-222ENST00000617806 DPH5Q9H2P9 285 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
BECN1-222ENST00000617806 TMEM232C9JQI7 657 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 KRIT1O00522 736 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 NR5A1Q13285 461 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 CALCRLQ16602 461 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 FMNL3Q8IVF7 1028 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 TUBGCP2Q9BSJ2 902 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 UAP1Q16222 522 aaPredicted RBP12.39□□□□□ -0.43
BECN1-222ENST00000617806 INF2Q27J81 1249 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 SYCE1Q8N0S2 351 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 ANKRD42Q8N9B4 389 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
BECN1-222ENST00000617806 TFAP4Q01664 338 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 EHHADHQ08426 723 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 ZNF365Q70YC5 407 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 BLIDQ8IZY5 108 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
BECN1-222ENST00000617806 TRPM1Q7Z4N2 1603 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
BECN1-222ENST00000617806 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 USP17L21D6R901 530 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 CLTAP09496 248 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 CXCR5P32302 372 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 RASSF7Q02833 373 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 CROCCP2Q86T23 111 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 GBP1P32455 592 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 ZNF131P52739 623 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 CCDC170Q8IYT3 715 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
BECN1-222ENST00000617806 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
BECN1-222ENST00000617806 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 KRT12Q99456 494 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
BECN1-222ENST00000617806 ABCB4P21439 1286 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 RFC4P35249 363 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 TECP42680 631 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 RAB17Q9H0T7 212 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 PLCG2P16885 1265 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 TCIRG1Q13488 830 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 TBC1D31Q96DN5 1066 aa12.38□□□□□ -0.43
BECN1-222ENST00000617806 CALUO43852 315 aaPredicted RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 GCKP35557 465 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 EPHB4P54760 987 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 POLR2FP61218 127 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 NEDD9Q14511 834 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 HAUS3Q68CZ6 603 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 ADAT2Q7Z6V5 191 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 CNOT6LQ96LI5 555 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 PANX2Q96RD6 677 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 EPB41L5Q9HCM4 733 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
BECN1-222ENST00000617806 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.37□□□□□ -0.43
BECN1-222ENST00000617806 CHMP2AO43633 222 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 FMR1NBQ8N0W7 255 aaPredicted RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 U2AF1L4Q8WU68 220 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
BECN1-222ENST00000617806 AMFRQ9UKV5 643 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 DDIT3P35638 169 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 REXO1Q8N1G1 1221 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 ANKRD7Q92527 254 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 PPP1R1BQ9UD71 204 aaPredicted RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
BECN1-222ENST00000617806 NDUFA10O95299 355 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 SCG2P13521 617 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 KRT5P13647 590 aa12.37□□□□□ -0.43
BECN1-222ENST00000617806 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms