RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 CD44P16070 742 aaKnown RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 STX17P56962 302 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 RBM17Q96I25 401 aaKnown RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 DESI2Q9BSY9 194 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 CD209Q9NNX6 404 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 ST7Q9NRC1 585 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 POLLQ9UGP5 575 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 A0A1B0GTH6 734 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 TSPY2A6NKD2 308 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 POLRMTO00411 1230 aaKnown RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 TEX33O43247 280 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 PRPF3O43395 683 aaKnown RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 TADA3O75528 432 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 ZNF771Q7L3S4 317 aaPredicted RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 PAGE5Q96GU1 130 aa22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 SRRTQ9BXP5 876 aaKnown RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 SAP30BPQ9UHR5 308 aaKnown RBP22.69■■□□□ 1.22
PCDHA13-203ENST00000617769 SMYD4Q8IYR2 804 aaPredicted RBP22.68■■□□□ 1.22
PCDHA13-203ENST00000617769 ARPP21Q9UBL0 812 aaPredicted RBP22.68■■□□□ 1.22
PCDHA13-203ENST00000617769 GGA1Q9UJY5 639 aa22.68■■□□□ 1.22
PCDHA13-203ENST00000617769 ZNF174Q15697 407 aa22.68■■□□□ 1.22
PCDHA13-203ENST00000617769 SLC44A5Q8NCS7 719 aa22.68■■□□□ 1.22
PCDHA13-203ENST00000617769 CASQ1P31415 396 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 MTF1Q14872 753 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 APTXQ7Z2E3 356 aaKnown RBP22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 MAPKAPK5Q8IW41 473 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 FHOD1Q9Y613 1164 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 BAZ2BQ9UIF8 2168 aaKnown RBP22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 GOLGA6L9A6NEM1 432 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 C6orf229H3BNL8 230 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 BMS1Q14692 1282 aaKnown RBP22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 TERF2Q15554 542 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 SH3RF1Q7Z6J0 888 aa22.67■■□□□ 1.22
PCDHA13-203ENST00000617769 EFCAB8A8MWE9 144 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 ORC4O43929 436 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 NPY5RQ15761 445 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 SPATA1Q5VX52 437 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 CCDC34Q96HJ3 373 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 MTMR7Q9Y216 660 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 SYNRGQ9UMZ2 1314 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 RIMBP2O15034 1052 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 TFAP4Q01664 338 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 CUL4BQ13620 913 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 TBC1D16Q8TBP0 767 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 STAMQ92783 540 aa22.66■■□□□ 1.22
PCDHA13-203ENST00000617769 SOWAHDA6NJG2 315 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 VEGFAP15692 232 aaPredicted RBP22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 KARSQ15046 597 aaKnown RBP22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 SBK1Q52WX2 424 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 SRBD1Q8N5C6 995 aaKnown RBP22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 EPC1Q9H2F5 836 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 RBM28Q9NW13 759 aaKnown RBP22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 AKR1B15C9JRZ8 316 aaPredicted RBP22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 MAP3K9P80192 1104 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 DPYDQ12882 1025 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 C12orf60Q5U649 245 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 FERMT2Q96AC1 680 aa22.65■■□□□ 1.22
PCDHA13-203ENST00000617769 CCDC88AQ3V6T2 1871 aa22.64■■□□□ 1.22
PCDHA13-203ENST00000617769 USP17L3A6NCW0 530 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 USP17L4A6NCW7 530 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 USP17L1Q7RTZ2 530 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 CPLX3Q8WVH0 158 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 TNFRSF25Q93038 417 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 KIFC2Q96AC6 838 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 MRPL44Q9H9J2 332 aaKnown RBP22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 BRMS1Q9HCU9 246 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 IL17RBQ9NRM6 502 aa22.64■■□□□ 1.21
PCDHA13-203ENST00000617769 PNMA6AP0CW24 399 aaPredicted RBP22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 PCP11498 1178 aaKnown RBP22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 ATP2B4P23634 1241 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 RBL2Q08999 1139 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 PTGDRQ13258 359 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 TTC38Q5R3I4 469 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 RCSD1Q6JBY9 416 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 TMTC3Q6ZXV5 915 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 IGSF22Q8N9C0 903 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 IRX2Q9BZI1 471 aaPredicted RBP22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 BTDP43251 543 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 MFSD14BQ5SR56 506 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 GSDMAQ96QA5 445 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 RTFDC1Q9BY42 306 aaPredicted RBP22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 ARGLU1Q9NWB6 273 aaPredicted RBP22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 ADD3Q9UEY8 706 aaKnown RBP22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 MRFAP1Q9Y605 127 aa22.63■■□□□ 1.21
PCDHA13-203ENST00000617769 PPP1R3GB7ZBB8 358 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 COBLO75128 1261 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 BBOX1O75936 387 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 BAG3O95817 575 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 CDKAL1Q5VV42 579 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 TMCO3Q6UWJ1 677 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 MKNK2Q9HBH9 465 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 BMP15O95972 392 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 CALM1P0DP23 149 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 CALM2P0DP24 149 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 CALM3P0DP25 149 aa22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 CT47A1Q5JQC4 288 aaPredicted RBP22.62■■□□□ 1.21
PCDHA13-203ENST00000617769 COL23A1Q86Y22 540 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms