RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 IGHA2P01877 340 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 POLR3DP05423 398 aaPredicted RBP10.31□□□□□ -0.76
GPC6-202ENST00000617456 SHMT1P34896 483 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 PLCD1P51178 756 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 COG2Q14746 738 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 SNX17Q15036 470 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
GPC6-202ENST00000617456 NCAPG2Q86XI2 1143 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 EAF2Q96CJ1 260 aaPredicted RBP10.31□□□□□ -0.76
GPC6-202ENST00000617456 KIF1BPQ96EK5 621 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
GPC6-202ENST00000617456 SPATC1LQ9H0A9 340 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 EHD4Q9H223 541 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 SLC5A4Q9NY91 659 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 DBNLQ9UJU6 430 aaKnown RBP10.31□□□□□ -0.76
GPC6-202ENST00000617456 SPTBN5Q9NRC6 3674 aaKnown RBP10.31□□□□□ -0.76
GPC6-202ENST00000617456 MYH1P12882 1939 aa10.31□□□□□ -0.76
GPC6-202ENST00000617456 FOCADQ5VW36 1801 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 MYO5AQ9Y4I1 1855 aaKnown RBP10.3□□□□□ -0.76
GPC6-202ENST00000617456 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 STRNO43815 780 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 PQBP1O60828 265 aaKnown RBP10.3□□□□□ -0.76
GPC6-202ENST00000617456 ITGB8P26012 769 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 EPHB4P54760 987 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 EVX2Q03828 476 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 MAP3K12Q12852 859 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
GPC6-202ENST00000617456 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
GPC6-202ENST00000617456 ANTXR1Q9H6X2 564 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 C1orf115Q9H7X2 142 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 HOXC10Q9NYD6 342 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 RLFQ13129 1914 aa10.3□□□□□ -0.76
GPC6-202ENST00000617456 MYO9BQ13459 2157 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 FLOT1O75955 427 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 PGK1P00558 417 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 CLTBP09497 229 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 RARBP10826 455 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 GRIN2CQ14957 1233 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 KIAA1755Q5JYT7 1200 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 SPICE1Q8N0Z3 855 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 USP38Q8NB14 1042 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 SHCBP1Q8NEM2 672 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 RHPN1Q8TCX5 695 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 PANK1Q8TE04 598 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 PPM1EQ8WY54 764 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 ATG4CQ96DT6 458 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 MAML3Q96JK9 1138 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 RCAN3Q9UKA8 241 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 TACC3Q9Y6A5 838 aa10.29□□□□□ -0.76
GPC6-202ENST00000617456 CDH23Q9H251 3354 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 MAGEB6P1A0A0J9YX57 407 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 PGK2P07205 417 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 RAG1P15918 1043 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 DSG3P32926 999 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 FPGSQ05932 587 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 CLEC10AQ8IUN9 316 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
GPC6-202ENST00000617456 LENG1Q96BZ8 264 aaPredicted RBP10.28□□□□□ -0.76
GPC6-202ENST00000617456 MROH8Q9H579 483 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 TMEM39AQ9NV64 488 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 MCM9Q9NXL9 1143 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
GPC6-202ENST00000617456 TMEM265A0A087WTH1 108 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 CYP2D6P10635 497 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 FCER1AP12319 257 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 TAL1P17542 331 aaPredicted RBP10.27□□□□□ -0.77
GPC6-202ENST00000617456 COL9A1P20849 921 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 DNAJB2P25686 324 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 GABPAQ06546 454 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 TJAP1Q5JTD0 557 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 RNF180Q86T96 592 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 AACSQ86V21 672 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 ABRAQ8N0Z2 381 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 MB21D1Q8N884 522 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 SLC44A5Q8NCS7 719 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 MMP19Q99542 508 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 RAPGEFL1Q9UHV5 662 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 EXOC6BQ9Y2D4 811 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 SMCHD1A6NHR9 2005 aa10.27□□□□□ -0.77
GPC6-202ENST00000617456 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.26□□□□□ -0.77
GPC6-202ENST00000617456 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.26□□□□□ -0.77
GPC6-202ENST00000617456 A0A1W2PQ45 241 aaPredicted RBP10.26□□□□□ -0.77
GPC6-202ENST00000617456 A0A1W2PQY0 241 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 TNFRSF10AO00220 468 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 KIAA0355O15063 1070 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
GPC6-202ENST00000617456 TMEM132BQ14DG7 1078 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 TMEM179Q6ZVK1 233 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 SDR42E1Q8WUS8 393 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 TIFAQ96CG3 184 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 DYNLL2Q96FJ2 89 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 RIOK1Q9BRS2 568 aaKnown RBP10.26□□□□□ -0.77
GPC6-202ENST00000617456 CRNKL1Q9BZJ0 848 aaKnown RBP10.26□□□□□ -0.77
GPC6-202ENST00000617456 ZNF576Q9H609 170 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 ARHGEF10LQ9HCE6 1279 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 ZNF236Q9UL36 1845 aa10.26□□□□□ -0.77
GPC6-202ENST00000617456 NCOR1O75376 2440 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms