RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PDE6AP16499 860 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 FAM102BQ5T8I3 360 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 FAM186BQ8IYM0 893 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 LRRC8CQ8TDW0 803 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ANKRD2Q9GZV1 360 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 DRC3Q9H069 523 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 SPATS2LQ9NUQ6 558 aaKnown RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 SAR1BQ9Y6B6 198 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ALDH1L1O75891 902 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 CSPG5O95196 566 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ATF2P15336 505 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 SLC1A4P43007 532 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ADKP55263 362 aaKnown RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 TMEM259Q4ZIN3 620 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 FAM47CQ5HY64 1035 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 KSR2Q6VAB6 950 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 KRT28Q7Z3Y7 464 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 TPH2Q8IWU9 490 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 CCDC124Q96CT7 223 aaKnown RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 MAGED2Q9UNF1 606 aaPredicted RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 CFBP00751 764 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ZKSCAN8Q15776 578 aaPredicted RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 GOLGA8CPA6NN73 597 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 WASLO00401 505 aaPredicted RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 EVI5O60447 810 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 IFNAR2P48551 515 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ATP8B2P98198 1209 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 IQCB1Q15051 598 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 KAZNQ674X7 775 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 NUDCD3Q8IVD9 361 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 LARSQ9P2J5 1176 aaKnown RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 hCG_1642624A0A1W2PR95 340 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 XPAP23025 273 aaPredicted RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 BLVRAP53004 296 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 NONOQ15233 471 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFX3-212ENST00000617270 TBCCQ15814 346 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 ANGPTL8Q6UXH0 198 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 RAPH1Q70E73 1250 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 DIS3L2Q8IYB7 885 aaKnown RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 HAUS1Q96CS2 278 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 SUCLA2Q9P2R7 463 aaPredicted RBP6.59□□□□□ -1.35
RFX3-212ENST00000617270 TEKT2Q9UIF3 430 aa6.59□□□□□ -1.35
RFX3-212ENST00000617270 RPSAP08865 295 aaKnown RBP6.59□□□□□ -1.36
RFX3-212ENST00000617270 PGBD1Q96JS3 809 aa6.59□□□□□ -1.36
RFX3-212ENST00000617270 BEGAINQ9BUH8 593 aa6.59□□□□□ -1.36
RFX3-212ENST00000617270 CBX8Q9HC52 389 aa6.59□□□□□ -1.36
RFX3-212ENST00000617270 ZNF277Q9NRM2 450 aaPredicted RBP6.59□□□□□ -1.36
RFX3-212ENST00000617270 ANAPC5Q9UJX4 755 aa6.59□□□□□ -1.36
RFX3-212ENST00000617270 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.36
RFX3-212ENST00000617270 DKC1O60832 514 aaKnown RBP eCLIP6.58□□□□□ -1.365e-6■□□□□ 9.1
RFX3-212ENST00000617270 POSTNQ15063 836 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 KCTD16Q68DU8 428 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 SNX21Q969T3 373 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 IPO11Q9UI26 975 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 PCDHB13Q9Y5F0 798 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 FBLN1P23142 703 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 GARSP41250 739 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 RYBPQ8N488 228 aaPredicted RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 ANKRD44Q8N8A2 993 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 EPS15L1Q9UBC2 864 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 GOLGA8KD6RF30 607 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 ESRRGP62508 458 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 PNOCQ13519 176 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 PDZD4Q76G19 769 aaPredicted RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 DEPTORQ8TB45 409 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 NR1H4Q96RI1 486 aaPredicted RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 EIF2AQ9BY44 585 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 WDR97A6NE52 1622 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 FGD5Q6ZNL6 1462 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 SNX1Q13596 522 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 METTL14Q9HCE5 456 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 INTUQ9ULD6 942 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 XRCC5P13010 732 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 KRT10P13645 584 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 ZCRB1Q8TBF4 217 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 ZNF202O95125 648 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 ATL3Q6DD88 541 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 FAM173BQ6P4H8 233 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 CCDC84Q86UT8 332 aaPredicted RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 BCAS4Q8TDM0 211 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 PHKBQ93100 1093 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 RBM17Q96I25 401 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 PAGR1Q9BTK6 254 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 C1orf112Q9NSG2 853 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 AQRO60306 1485 aaKnown RBP eCLIP6.58□□□□□ -1.36
RFX3-212ENST00000617270 GTPBP10A4D1E9 387 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 POC1B-GALNT4F8VUJ3 575 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 PDE6CP51160 858 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 E2F5Q15329 346 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 TTBK2Q6IQ55 1244 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 MLKLQ8NB16 471 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 TEKT1Q969V4 418 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 UBN1Q9NPG3 1134 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 SCINQ9Y6U3 715 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 CUTAO60888 179 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 DTNBO60941 627 aa6.58□□□□□ -1.36
RFX3-212ENST00000617270 DLATP10515 647 aaKnown RBP6.58□□□□□ -1.36
RFX3-212ENST00000617270 RLBP1P12271 317 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms