RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
NEK3-207ENST00000617054 HLA-DOAP06340 250 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 KRT2P35908 639 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 RCAN1P53805 252 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 GRM4Q14833 912 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 NBPF9Q3BBW0 867 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 RSBN1LQ6PCB5 846 aaPredicted RBP8.96□□□□□ -0.97
NEK3-207ENST00000617054 SUPT20HQ8NEM7 779 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 KCNG4Q8TDN1 519 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 MRPS27Q92552 414 aaKnown RBP8.96□□□□□ -0.97
NEK3-207ENST00000617054 MTFR1LQ9H019 292 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.97
NEK3-207ENST00000617054 PALM3A6NDB9 673 aaPredicted RBP8.96□□□□□ -0.98
NEK3-207ENST00000617054 BIN1O00499 593 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 PARP1P09874 1014 aaKnown RBP8.96□□□□□ -0.98
NEK3-207ENST00000617054 PFKFB1P16118 471 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 PPP2R5BQ15173 497 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 PFKFB3Q16875 520 aaPredicted RBP8.96□□□□□ -0.98
NEK3-207ENST00000617054 WWC2Q6AWC2 1192 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 LUZP1Q86V48 1076 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 PDILTQ8N807 584 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 PIGSQ96S52 555 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 SDF4Q9BRK5 362 aa8.96□□□□□ -0.98
NEK3-207ENST00000617054 FOXP1Q9H334 677 aaPredicted RBP8.96□□□□□ -0.98
NEK3-207ENST00000617054 KINO60870 393 aaKnown RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 YEATS4O95619 227 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 XBP1P17861 261 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 PRELPP51888 382 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 SNAP25P60880 206 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 FAM160A1Q05DH4 1040 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 TYRO3Q06418 890 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 SEPT2Q15019 361 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 CERKLQ49MI3 558 aaPredicted RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 ANO6Q4KMQ2 910 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 CC2D2BQ6DHV5 1058 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 FMR1NBQ8N0W7 255 aaPredicted RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 OGFOD1Q8N543 542 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 ANKS1AQ92625 1134 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 CSRNP1Q96S65 589 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 PSMD1Q99460 953 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 TMEM39BQ9GZU3 492 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 DNAJC25Q9H1X3 360 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 USP25Q9UHP3 1055 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 NFKBIEO00221 500 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 ZNF202O95125 648 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 PDHBP11177 359 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 TOP1P11387 765 aaKnown RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 ATL3Q6DD88 541 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 NIM1KQ8IY84 436 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 COA7Q96BR5 231 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 NUP88Q99567 741 aaPredicted RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 DDX19AQ9NUU7 478 aaKnown RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 PI4KBQ9UBF8 816 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 FOXN1O15353 648 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 AP5Z1O43299 807 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 VIL1P09327 827 aaKnown RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 TAL1P17542 331 aaPredicted RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 CDC25AP30304 524 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 MCM7P33993 719 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 DLGAP5Q15398 846 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 CCDC84Q86UT8 332 aaPredicted RBP8.95□□□□□ -0.98
NEK3-207ENST00000617054 TRIM34Q9BYJ4 488 aa8.95□□□□□ -0.98
NEK3-207ENST00000617054 SPDYE2BA6NHP3 402 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 LETM1O95202 739 aaPredicted RBP8.94□□□□□ -0.98
NEK3-207ENST00000617054 SPDYE6P0CI01 402 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 CCDC192P0DO97 292 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 EEF2P13639 858 aaKnown RBP8.94□□□□□ -0.98
NEK3-207ENST00000617054 SPICE1Q8N0Z3 855 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 UIMC1Q96RL1 719 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 TAOK3Q9H2K8 898 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 ZNRF3Q9ULT6 936 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 GJA3Q9Y6H8 435 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 ASTN2O75129 1339 aaPredicted RBP8.94□□□□□ -0.98
NEK3-207ENST00000617054 DLEC1Q9Y238 1755 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 TTLL1O95922 423 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 TGFB2P61812 414 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 SASS6Q6UVJ0 657 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 SIAH1Q8IUQ4 282 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
NEK3-207ENST00000617054 IDI2Q9BXS1 227 aa8.94□□□□□ -0.98
NEK3-207ENST00000617054 GH2P01242 217 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 CCDC96Q2M329 555 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 LONRF3Q496Y0 759 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 RILPL1Q5EBL4 403 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 SAMD7Q7Z3H4 446 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 GRAMD1CQ8IYS0 662 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 JDP2Q8WYK2 163 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 EPSTI1Q96J88 318 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 GMLQ99445 158 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 ZNF70Q9UC06 446 aaPredicted RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 FZD1Q9UP38 647 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 PTGER2P43116 358 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 C11orf57Q6ZUT1 292 aaPredicted RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 TNFRSF25Q93038 417 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 CSRNP2Q9H175 543 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 BIN2Q9UBW5 565 aaPredicted RBP8.93□□□□□ -0.98
NEK3-207ENST00000617054 IGKV6D-41A0A0C4DH26 115 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 STXBP3O00186 592 aa8.93□□□□□ -0.98
NEK3-207ENST00000617054 WNT10BO00744 389 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms