RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 CYTH3O43739 400 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 PTPREP23469 700 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 TYW1BQ6NUM6 668 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 VAT1LQ9HCJ6 419 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 PTGS1P23219 599 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 GRM4Q14833 912 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
SEMA3B-212ENST00000616701 MYH1P12882 1939 aa17.8■□□□□ 0.44
SEMA3B-212ENST00000616701 HEATR3Q7Z4Q2 680 aa17.8■□□□□ 0.44
SEMA3B-212ENST00000616701 HOMER1Q86YM7 354 aa17.8■□□□□ 0.44
SEMA3B-212ENST00000616701 DDX60LQ5H9U9 1706 aaKnown RBP17.8■□□□□ 0.44
SEMA3B-212ENST00000616701 SERTAD1Q9UHV2 236 aa17.8■□□□□ 0.44
SEMA3B-212ENST00000616701 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■□□□ 12.7
SEMA3B-212ENST00000616701 NFIAQ12857 509 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 KRBA2Q6ZNG9 492 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 FOXP4Q8IVH2 680 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 TNFRSF25Q93038 417 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 EPSTI1Q96J88 318 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 KCNF1Q9H3M0 494 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 SLC15A2Q16348 729 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 TRERF1Q96PN7 1200 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 TRIM34Q9BYJ4 488 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 ZNF287Q9HBT7 754 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 PRR29P0C7W0 189 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 AKR1B1P15121 316 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 MCM7P33993 719 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 TCP10Q12799 353 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 TTC38Q5R3I4 469 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 CDC42EP5Q6NZY7 148 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 CCDC186Q7Z3E2 898 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 PLA2G4DQ86XP0 818 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 LRRC47Q8N1G4 583 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 ANKS1AQ92625 1134 aa17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 SRPRBQ9Y5M8 271 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-212ENST00000616701 FRMPD2Q68DX3 1309 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 FAM196BA6NMK8 535 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 KLRF2D3W0D1 207 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 NLRP12P59046 1061 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 NEDD1Q8NHV4 660 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 UBA5Q9GZZ9 404 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 TCP11L1Q9NUJ3 509 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 CEP131Q9UPN4 1083 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 AOC3Q16853 763 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 WWC2Q6AWC2 1192 aa17.78■□□□□ 0.44
SEMA3B-212ENST00000616701 SLX4Q8IY92 1834 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 CAVIN2O95810 425 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 FAM193AP78312 1265 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 TIGD1Q96MW7 591 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 NAT10Q9H0A0 1025 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 PCDHA5Q9Y5H7 936 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 USP17L5A8MUK1 530 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 PTGDRQ13258 359 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 EP400NLQ6ZTU2 488 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 TEKT1Q969V4 418 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 DHX58Q96C10 678 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 CLIP2Q9UDT6 1046 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
SEMA3B-212ENST00000616701 A0A087X0B3 334 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 FAM237AA0A1B0GTK4 181 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 ECE2O60344 883 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 CRKP46108 304 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 LRMPQ12912 555 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 CASP1P29466 404 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 BLIDQ8IZY5 108 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 STK32BQ9NY57 414 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 CCDC144BQ3MJ40 725 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 CCDC178Q5BJE1 867 aa17.76■□□□□ 0.43
SEMA3B-212ENST00000616701 DEFB132Q7Z7B7 95 aa17.75■□□□□ 0.43
SEMA3B-212ENST00000616701 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
SEMA3B-212ENST00000616701 AFMP43652 599 aa17.75■□□□□ 0.43
SEMA3B-212ENST00000616701 STAMQ92783 540 aa17.75■□□□□ 0.43
SEMA3B-212ENST00000616701 CAMKK2Q96RR4 588 aa17.75■□□□□ 0.43
SEMA3B-212ENST00000616701 GOLGA6L6A8MZA4 724 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 C21orf2O43822 256 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 GNAQP50148 359 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 ARID5BQ14865 1188 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 HSP90AA4PQ58FG1 418 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 OSBPL5Q9H0X9 879 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 TUBE1Q9UJT0 475 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 RAD21O60216 631 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 TOP1P11387 765 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 CDC25AP30304 524 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 SERPINB13Q9UIV8 391 aa17.74■□□□□ 0.43
SEMA3B-212ENST00000616701 GABPAQ06546 454 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 POSTNQ15063 836 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms