RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TAL1P17542 331 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-209ENST00000616395 CYP7A1P22680 504 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 SHMT1P34896 483 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 SEPT2Q15019 361 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 TMEM240Q5SV17 173 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 RASIP1Q5U651 963 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 MIGA1Q8NAN2 632 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 LENG1Q96BZ8 264 aaPredicted RBP21.31■■□□□ 1
TRAPPC3-209ENST00000616395 TBX21Q9UL17 535 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
TRAPPC3-209ENST00000616395 FCER1AP12319 257 aa21.3■■□□□ 1
TRAPPC3-209ENST00000616395 C20orf194Q5TEA3 1177 aa21.3■■□□□ 1
TRAPPC3-209ENST00000616395 MFSD5Q6N075 450 aa21.3■■□□□ 1
TRAPPC3-209ENST00000616395 TTC6Q86TZ1 520 aa21.3■■□□□ 1
TRAPPC3-209ENST00000616395 STARD7Q9NQZ5 370 aa21.3■■□□□ 1
TRAPPC3-209ENST00000616395 PLXNA1Q9UIW2 1896 aa21.3■■□□□ 1
TRAPPC3-209ENST00000616395 ADAMTS4O75173 837 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 GNAI3P08754 354 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 ZAP70P43403 619 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 ACLYP53396 1101 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 G3BP1Q13283 466 aaKnown RBP eCLIP21.29■■□□□ 1
TRAPPC3-209ENST00000616395 PPIGQ13427 754 aaKnown RBP eCLIP21.29■■□□□ 12e-6■■□□□ 13.5
TRAPPC3-209ENST00000616395 ITPRIPQ8IWB1 547 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 MB21D1Q8N884 522 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 PANK1Q8TE04 598 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 DBNDD2Q9BQY9 259 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 MYH1P12882 1939 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 PGK2P07205 417 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 BMP1P13497 986 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 DSG3P32926 999 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 PLCD1P51178 756 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 KIAA1755Q5JYT7 1200 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 CCDC158Q5M9N0 1113 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 CCDC174Q6PII3 467 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 ATG4CQ96DT6 458 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 TINF2Q9BSI4 451 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 TSEN34Q9BSV6 310 aaKnown RBP21.29■■□□□ 1
TRAPPC3-209ENST00000616395 C1orf115Q9H7X2 142 aa21.29■■□□□ 1
TRAPPC3-209ENST00000616395 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 ZNF865P0CJ78 1059 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-209ENST00000616395 ACRP10323 421 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 AKR1A1P14550 325 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 CSF2RAP15509 400 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 ZNF365Q70YC5 407 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 NUP133Q8WUM0 1156 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 CXXC1Q9P0U4 656 aaPredicted RBP21.28■■□□□ 1
TRAPPC3-209ENST00000616395 COG6Q9Y2V7 657 aa21.28■■□□□ 1
TRAPPC3-209ENST00000616395 XIRP2A4UGR9 3374 aa21.27■■□□□ 1
TRAPPC3-209ENST00000616395 SYNGAP1Q96PV0 1343 aa21.27■■□□□ 1
TRAPPC3-209ENST00000616395 SMCHD1A6NHR9 2005 aa21.27■□□□□ 0.99
TRAPPC3-209ENST00000616395 IGSF3O75054 1194 aa21.27■□□□□ 0.99
TRAPPC3-209ENST00000616395 MMP19Q99542 508 aa21.27■□□□□ 0.99
TRAPPC3-209ENST00000616395 NKX2-4Q9H2Z4 354 aa21.27■□□□□ 0.99
TRAPPC3-209ENST00000616395 MSRAQ9UJ68 235 aa21.27■□□□□ 0.99
TRAPPC3-209ENST00000616395 MYO5AQ9Y4I1 1855 aaKnown RBP21.27■□□□□ 0.99
TRAPPC3-209ENST00000616395 SYNRGQ9UMZ2 1314 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 PNMA6EA0A0J9YXQ4 647 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 MPHOSPH10O00566 681 aaKnown RBP21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 FLOT1O75955 427 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 GNAI2P04899 355 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 TFF2Q03403 129 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 TMEM132BQ14DG7 1078 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 RAB30Q15771 203 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 TNNI3KQ59H18 835 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 SAMD1Q6SPF0 538 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 TSPYL2Q9H2G4 693 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 ARIH1Q9Y4X5 557 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 FPGT-TNNI3KV9GXZ4 949 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 REV3LO60673 3130 aa21.26■□□□□ 0.99
TRAPPC3-209ENST00000616395 IDH1O75874 414 aaKnown RBP21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 SLC25A27O95847 323 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 KCNA10Q16322 511 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 ZNF792Q3KQV3 632 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 CERS3Q8IU89 383 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 TMEM199Q8N511 208 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 KLHDC9Q8NEP7 349 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 CHD7Q9P2D1 2997 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 HCN4Q9Y3Q4 1203 aa21.25■□□□□ 0.99
TRAPPC3-209ENST00000616395 MOXD2PA6NHM9 499 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 EVX2Q03828 476 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 GABPAQ06546 454 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 CCSAPQ6IQ19 270 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 PSRC1Q6PGN9 363 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 CENPQQ7L2Z9 268 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 SPICE1Q8N0Z3 855 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 MAGEB6Q8N7X4 407 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 ZNF512BQ96KM6 892 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 LRFN3Q9BTN0 628 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 SLC28A3Q9HAS3 691 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 GPR108Q9NPR9 543 aa21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 DIS3Q9Y2L1 958 aaKnown RBP21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 YBX2Q9Y2T7 364 aaKnown RBP21.24■□□□□ 0.99
TRAPPC3-209ENST00000616395 CDK7P50613 346 aa21.23■□□□□ 0.99
TRAPPC3-209ENST00000616395 KCNQ1P51787 676 aa21.23■□□□□ 0.99
TRAPPC3-209ENST00000616395 MICALL1Q8N3F8 863 aa21.23■□□□□ 0.99
TRAPPC3-209ENST00000616395 PPP1R12CQ9BZL4 782 aa21.23■□□□□ 0.99
TRAPPC3-209ENST00000616395 EPHX3Q9H6B9 360 aa21.23■□□□□ 0.99
TRAPPC3-209ENST00000616395 CNPY2Q9Y2B0 182 aa21.23■□□□□ 0.99
TRAPPC3-209ENST00000616395 NCOR1O75376 2440 aa21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 MROH7Q68CQ1 1323 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms