RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 MARK1Q9P0L2 795 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 NARFQ9UHQ1 456 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 WWC3Q9ULE0 1092 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 USP20Q9Y2K6 914 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 RIPOR2Q9Y4F9 1068 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 KCNMB2Q9Y691 235 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 SCN7AQ01118 1682 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 RIC1Q4ADV7 1423 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 TAF1LQ8IZX4 1826 aa10.14□□□□□ -0.79
CCL3-205ENST00000613928 A0A1B0GUL7 405 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 EGFRP00533 1210 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 COL19A1Q14993 1142 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 RABEP1Q15276 862 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 TAF7LQ5H9L4 462 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 PDE12Q6L8Q7 609 aaKnown RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 COL23A1Q86Y22 540 aaPredicted RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 EDC3Q96F86 508 aaKnown RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 NEUROD6Q96NK8 337 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 HAUS7Q99871 368 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 SRP68Q9UHB9 627 aaKnown RBP10.13□□□□□ -0.79
CCL3-205ENST00000613928 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
CCL3-205ENST00000613928 LAMB2P55268 1798 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 TREHO43280 583 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 XYLBO75191 536 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
CCL3-205ENST00000613928 ADORA1P30542 326 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 SFSWAPQ12872 951 aaKnown RBP10.12□□□□□ -0.79
CCL3-205ENST00000613928 NMIQ13287 307 aaPredicted RBP10.12□□□□□ -0.79
CCL3-205ENST00000613928 TRIP4Q15650 581 aaPredicted RBP10.12□□□□□ -0.79
CCL3-205ENST00000613928 USPL1Q5W0Q7 1092 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 CWC27Q6UX04 472 aaKnown RBP10.12□□□□□ -0.79
CCL3-205ENST00000613928 NPAS4Q8IUM7 802 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 DIAPH3Q9NSV4 1193 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 C4BP0C0L5 1744 aa10.12□□□□□ -0.79
CCL3-205ENST00000613928 GPR182O15218 404 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 IGHA2P01877 340 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 FGFR3P22607 806 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 HSPA4P34932 840 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 XKR5Q6UX68 686 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 LDHAL6AQ6ZMR3 332 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 ZNF438Q7Z4V0 828 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 VGLL2Q8N8G2 317 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 RUFY2Q8WXA3 655 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 FAM227BQ96M60 508 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 FSD1Q9BTV5 496 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 ANTXR1Q9H6X2 564 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 EFCC1Q9HA90 598 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 SEC31BQ9NQW1 1179 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 RTL9Q8NET4 1388 aa10.11□□□□□ -0.79
CCL3-205ENST00000613928 RAD50Q92878 1312 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 A0A0D9SFI3 127 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 HIP1O00291 1037 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 PTH1RQ03431 593 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 CCINQ13939 588 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 METTL24Q5JXM2 366 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 SLC10A5Q5PT55 438 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCL3-205ENST00000613928 DNAJC2Q99543 621 aaKnown RBP10.1□□□□□ -0.79
CCL3-205ENST00000613928 CNNM1Q9NRU3 951 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 RFX7Q2KHR2 1363 aa10.1□□□□□ -0.79
CCL3-205ENST00000613928 COL4A1P02462 1669 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 H3BM21 787 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
CCL3-205ENST00000613928 GPR25O00155 361 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 IFIT1P09914 478 aaKnown RBP10.09□□□□□ -0.79
CCL3-205ENST00000613928 CD33P20138 364 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 MCCP23508 829 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 ANAPC15P60006 121 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 DSC3Q14574 896 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 SF3B3Q15393 1217 aaKnown RBP10.09□□□□□ -0.79
CCL3-205ENST00000613928 ATP2B3Q16720 1220 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 CCDC152Q4G0S7 254 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 DDX46Q7L014 1031 aaKnown RBP10.09□□□□□ -0.79
CCL3-205ENST00000613928 SLKQ9H2G2 1235 aaPredicted RBP10.09□□□□□ -0.79
CCL3-205ENST00000613928 C4AP0C0L4 1744 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 ABCC12Q96J65 1359 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 MED23Q9ULK4 1368 aa10.09□□□□□ -0.79
CCL3-205ENST00000613928 PDE8BO95263 885 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 CHGBP05060 677 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 HSP90B1P14625 803 aaKnown RBP10.08□□□□□ -0.8
CCL3-205ENST00000613928 FGFR2P21802 821 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 FMR1Q06787 632 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCL3-205ENST00000613928 SPEM2Q0P670 501 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 KBTBD3Q8NAB2 608 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 KCNB2Q92953 911 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 GSX2Q9BZM3 304 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms