RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CHMLP26374 656 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 AP1B1Q10567 949 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 ANO5Q75V66 913 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 BAG5Q9UL15 447 aa9.62□□□□□ -0.87
TTC28-208ENST00000612946 EIF2S1P05198 315 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 SERPINB4P48594 390 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 CEP70Q8NHQ1 597 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 KRT12Q99456 494 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 LCMT1Q9UIC8 334 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 EEF1GP26641 437 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 SESTD1Q86VW0 696 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 DHX58Q96C10 678 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 MKNK2Q9HBH9 465 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 KCNG1Q9UIX4 513 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 MAP3K5Q99683 1374 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 MARCKSP29966 332 aaPredicted RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 HIBCHQ6NVY1 386 aaPredicted RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 GSDMAQ96QA5 445 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 IPO5O00410 1097 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 MMEP08473 750 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 ATF3P18847 181 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 METTL24Q5JXM2 366 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 ZNF530Q6P9A1 599 aaPredicted RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 LONP1P36776 959 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 MAGEA1P43355 309 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 GID8Q9NWU2 228 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 UTP6Q9NYH9 597 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 SPC25Q9HBM1 224 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 N4BP1O75113 896 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 IFIT5Q13325 482 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 CC2D1AQ6P1N0 951 aaPredicted RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 SEPT8Q92599 483 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 RRS1Q15050 365 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 RARS2Q5T160 578 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 UPF3AQ9H1J1 476 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 DIS3Q9Y2L1 958 aaKnown RBP9.61□□□□□ -0.87
TTC28-208ENST00000612946 EXOC5O00471 708 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 GSTO1P78417 241 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 DAB2IPQ5VWQ8 1189 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 CCDC80Q76M96 950 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 CSGALNACT2Q8N6G5 542 aa9.61□□□□□ -0.87
TTC28-208ENST00000612946 FAM13AO94988 1023 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
TTC28-208ENST00000612946 BASP1P80723 227 aaKnown RBP9.6□□□□□ -0.87
TTC28-208ENST00000612946 GNPTABQ3T906 1256 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
TTC28-208ENST00000612946 PHKBQ93100 1093 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 TMEM87BQ96K49 555 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 KIF9Q9HAQ2 790 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 TADA3O75528 432 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 CORO7P57737 925 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 LZTS2Q9BRK4 669 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 ARHGAP26Q9UNA1 814 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 ZNF483Q8TF39 744 aaPredicted RBP9.6□□□□□ -0.87
TTC28-208ENST00000612946 MID2Q9UJV3 735 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 H7C1D1 291 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 CASP14P31944 242 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 ATP8B2P98198 1209 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 BAG3O95817 575 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 KPNA2P52292 529 aaKnown RBP9.6□□□□□ -0.87
TTC28-208ENST00000612946 RAP1GDS1P52306 607 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 HAUS3Q68CZ6 603 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 FAM192AQ9GZU8 254 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 DNAJC17Q9NVM6 304 aaKnown RBP9.6□□□□□ -0.87
TTC28-208ENST00000612946 TBC1D8O95759 1140 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 PPP1R42Q7Z4L9 355 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 TNFAIP3P21580 790 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 ADRM1Q16186 407 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 CLEC17AQ6ZS10 378 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 PDLIM2Q96JY6 352 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 IFT140Q96RY7 1462 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 CAV1Q03135 178 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 SYCP2LQ5T4T6 812 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 TRIM63Q969Q1 353 aa9.6□□□□□ -0.87
TTC28-208ENST00000612946 DNMBPQ6XZF7 1577 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
TTC28-208ENST00000612946 PGRMC1O00264 195 aaKnown RBP9.59□□□□□ -0.87
TTC28-208ENST00000612946 DEXIO95424 95 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 C4BPBP20851 252 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 ATG16L1Q676U5 607 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 DBNLQ9UJU6 430 aaKnown RBP9.59□□□□□ -0.87
TTC28-208ENST00000612946 MYO1EQ12965 1108 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 ICA1LQ8NDH6 482 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.59□□□□□ -0.87
TTC28-208ENST00000612946 CUEDC2Q9H467 287 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 SNUPNO95149 360 aaKnown RBP9.59□□□□□ -0.87
TTC28-208ENST00000612946 CACYBPQ9HB71 228 aaKnown RBP9.59□□□□□ -0.87
TTC28-208ENST00000612946 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 MAP3K10Q02779 954 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 NEK9Q8TD19 979 aa9.59□□□□□ -0.87
TTC28-208ENST00000612946 PARD6BQ9BYG5 372 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms