RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CDC25AP30304 524 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 SPP2Q13103 211 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
FAM3A-221ENST00000612856 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 COA7Q96BR5 231 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 RRP15Q9Y3B9 282 aaKnown RBP12.2□□□□□ -0.46
FAM3A-221ENST00000612856 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
FAM3A-221ENST00000612856 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 NR1I2O75469 434 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 FILIP1LQ4L180 1135 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 ANKRD35Q8N283 1001 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 TTC14Q96N46 770 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 TBC1D7Q9P0N9 293 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 ZHX2Q9Y6X8 837 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 SLIT3O75094 1523 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 NEMFO60524 1076 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 SLURP2P0DP57 97 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 Q3C1V9 767 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 ODF2Q5BJF6 829 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 KRT40Q6A162 431 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 CCDC148Q8NFR7 591 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
FAM3A-221ENST00000612856 BAZ2BQ9UIF8 2168 aaKnown RBP12.2□□□□□ -0.46
FAM3A-221ENST00000612856 SPTLC2O15270 562 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 CYP2C19P33261 490 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 ASIC1P78348 528 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 RGS22Q8NE09 1264 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 PUF60Q9UHX1 559 aaKnown RBP12.2□□□□□ -0.46
FAM3A-221ENST00000612856 JRKLQ9Y4A0 524 aa12.2□□□□□ -0.46
FAM3A-221ENST00000612856 UTYO14607 1347 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 STAT6P42226 847 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 CASP7P55210 303 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 SEPT2Q15019 361 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 FAM47CQ5HY64 1035 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 DDR1Q08345 913 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 FANCBQ8NB91 859 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
FAM3A-221ENST00000612856 ZNF341Q9BYN7 854 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 FTOQ9C0B1 505 aaKnown RBP eCLIP12.19□□□□□ -0.46
FAM3A-221ENST00000612856 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
FAM3A-221ENST00000612856 KRT2P35908 639 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
FAM3A-221ENST00000612856 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
FAM3A-221ENST00000612856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.46
FAM3A-221ENST00000612856 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 GNA11P29992 359 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 INF2Q27J81 1249 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 STOX1Q6ZVD7 989 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 MTMR6Q9Y217 621 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 SSR1P43307 286 aaKnown RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 CYP4A11Q02928 519 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 TRIM28Q13263 835 aaKnown RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 ICE2Q659A1 982 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 ANO10Q9NW15 660 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 POLLQ9UGP5 575 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 PCDHA1Q9Y5I3 950 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 FAM208AQ9UK61 1670 aaKnown RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 PSMD14O00487 310 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
FAM3A-221ENST00000612856 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 SLC10A4Q96EP9 437 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 DSCC1Q9BVC3 393 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 NOD1Q9Y239 953 aa12.18□□□□□ -0.46
FAM3A-221ENST00000612856 ZNF609O15014 1411 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-221ENST00000612856 RDXP35241 583 aaKnown RBP12.17□□□□□ -0.46
FAM3A-221ENST00000612856 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-221ENST00000612856 RASA3Q14644 834 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 STX1AQ16623 288 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 NCAPH2Q6IBW4 605 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 SH2D4AQ9H788 454 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 EIF3JO75822 258 aaKnown RBP12.17□□□□□ -0.46
FAM3A-221ENST00000612856 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
FAM3A-221ENST00000612856 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
FAM3A-221ENST00000612856 DCAF15Q66K64 600 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 LCMT1Q9UIC8 334 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 SEMA3EO15041 775 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 CDK8P49336 464 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 SYCP1Q15431 976 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 EFCC1Q9HA90 598 aa12.17□□□□□ -0.46
FAM3A-221ENST00000612856 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
FAM3A-221ENST00000612856 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
FAM3A-221ENST00000612856 GSDMDP57764 484 aa12.16□□□□□ -0.46
FAM3A-221ENST00000612856 RHOXF2Q9BQY4 288 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms