RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
CCL3L3-201ENST00000612839 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CCL3L3-201ENST00000612839 B4E1Z4 1266 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 F5H6K3 240 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 MGAMO43451 1857 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 HERVK_113P62684 666 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 KLRC3Q07444 240 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 LRRC47Q8N1G4 583 aaKnown RBP13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 CD99L2Q8TCZ2 262 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 ESR2Q92731 530 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 SYNPO2Q9UMS6 1093 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 STX8Q9UNK0 236 aa13.37□□□□□ -0.27
CCL3L3-201ENST00000612839 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 KDM4AO75164 1064 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 NDUFB10O96000 172 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 NT5C2P49902 561 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 NECTIN1Q15223 517 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 RAD21O60216 631 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 PEX10O60683 326 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 CTGFP29279 349 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 FAM110CQ1W6H9 321 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 PPP4R3BQ5MIZ7 849 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 STOX1Q6ZVD7 989 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 GMCL1P1Q8NEA9 526 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 ZKSCAN3Q9BRR0 538 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 KRT23Q9C075 422 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 TXNRD2Q9NNW7 524 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
CCL3L3-201ENST00000612839 A0A0G2JMZ2 1700 aa13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 E7EWF7 191 aa13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 COG2Q14746 738 aa13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 FAM83BQ5T0W9 1011 aa13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 LBX2Q6XYB7 198 aa13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 MORF4L1Q9UBU8 362 aa13.35□□□□□ -0.27
CCL3L3-201ENST00000612839 SLC27A2O14975 620 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 FLOT1O75955 427 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 CYB5R4Q7L1T6 521 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 IQCA1Q86XH1 822 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 TTC14Q96N46 770 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 TRIM17Q9Y577 477 aa13.34□□□□□ -0.27
CCL3L3-201ENST00000612839 COL11A1P12107 1806 aaPredicted RBP13.33□□□□□ -0.27
CCL3L3-201ENST00000612839 CNMDO75829 334 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 PSMC4P43686 418 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 TRDNQ13061 729 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 Q3C1V9 767 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 SLFN13Q68D06 897 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 RASGRP2Q7LDG7 609 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 DGKHQ86XP1 1220 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 GTF3C2Q8WUA4 911 aaPredicted RBP13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 EFCC1Q9HA90 598 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 TNKSO95271 1327 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 MYPNQ86TC9 1320 aa13.33□□□□□ -0.28
CCL3L3-201ENST00000612839 DOCK3Q8IZD9 2030 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 HTTP42858 3142 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 PYGBP11216 843 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 MCCP23508 829 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 ERVK-9P63128 1117 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 ERVK-24P63145 666 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 KIF22Q14807 665 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 ENAHQ8N8S7 591 aaPredicted RBP13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 GPRC5AQ8NFJ5 357 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 MCOLN1Q9GZU1 580 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 BTBD7Q9P203 1132 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 ADAMTS5Q9UNA0 930 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
CCL3L3-201ENST00000612839 BMP3P12645 472 aa13.31□□□□□ -0.28
CCL3L3-201ENST00000612839 SLC1A4P43007 532 aa13.31□□□□□ -0.28
CCL3L3-201ENST00000612839 FCGRTP55899 365 aa13.31□□□□□ -0.28
CCL3L3-201ENST00000612839 SEC23AQ15436 765 aa13.31□□□□□ -0.28
CCL3L3-201ENST00000612839 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
CCL3L3-201ENST00000612839 MB21D2Q8IYB1 491 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms