RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 VPS54Q9P1Q0 977 aa17.08■□□□□ 0.33
CIT-219ENST00000612548 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.33
CIT-219ENST00000612548 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.33
CIT-219ENST00000612548 FZD1Q9UP38 647 aa17.08■□□□□ 0.33
CIT-219ENST00000612548 CNPY2Q9Y2B0 182 aa17.08■□□□□ 0.33
CIT-219ENST00000612548 DOCK1Q14185 1865 aa17.08■□□□□ 0.32
CIT-219ENST00000612548 WDR90Q96KV7 1748 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 SCG2P13521 617 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
CIT-219ENST00000612548 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
CIT-219ENST00000612548 DCAF4Q8WV16 495 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 SHISA4Q96DD7 197 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 GDPD2Q9HCC8 539 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 F5H6K3 240 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 NDUFB10O96000 172 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 XBP1P17861 261 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 INPP5BP32019 993 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 SLC1A4P43007 532 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 KLRC3Q07444 240 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 EAPPQ56P03 285 aaPredicted RBP17.07■□□□□ 0.32
CIT-219ENST00000612548 DLK2Q6UY11 383 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 GMCL1P1Q8NEA9 526 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
CIT-219ENST00000612548 VAT1LQ9HCJ6 419 aa17.07■□□□□ 0.32
CIT-219ENST00000612548 FIBPO43427 364 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 CTNND1O60716 968 aaKnown RBP17.06■□□□□ 0.32
CIT-219ENST00000612548 MMP1P03956 469 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
CIT-219ENST00000612548 SUPT20HL1Q3ZLR7 823 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 GPATCH4Q5T3I0 446 aaKnown RBP17.06■□□□□ 0.32
CIT-219ENST00000612548 TTBK2Q6IQ55 1244 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 HOMER1Q86YM7 354 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 WRNIP1Q96S55 665 aa17.06■□□□□ 0.32
CIT-219ENST00000612548 POTECB2RU33 542 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 SMARCA1P28370 1054 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.32
CIT-219ENST00000612548 NUP88Q99567 741 aaPredicted RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 RIOX1Q9H6W3 641 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 SYNPO2Q9UMS6 1093 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 TMX2Q9Y320 296 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 SLC16A2P36021 539 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 KRT85P78386 507 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 PRKG1Q13976 671 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 SAFBQ15424 915 aaKnown RBP eCLIP17.05■□□□□ 0.32
CIT-219ENST00000612548 ZYXQ15942 572 aaKnown RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 SPICE1Q8N0Z3 855 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 PIGSQ96S52 555 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 GOPCQ9HD26 462 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 SEC63Q9UGP8 760 aaKnown RBP17.05■□□□□ 0.32
CIT-219ENST00000612548 ZNF112Q9UJU3 913 aa17.05■□□□□ 0.32
CIT-219ENST00000612548 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
CIT-219ENST00000612548 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
CIT-219ENST00000612548 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
CIT-219ENST00000612548 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
CIT-219ENST00000612548 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
CIT-219ENST00000612548 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
CIT-219ENST00000612548 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
CIT-219ENST00000612548 WWC2Q6AWC2 1192 aa17.03■□□□□ 0.32
CIT-219ENST00000612548 SCYL3Q8IZE3 742 aa17.03■□□□□ 0.32
CIT-219ENST00000612548 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
CIT-219ENST00000612548 ZKSCAN4Q969J2 545 aaPredicted RBP17.03■□□□□ 0.32
CIT-219ENST00000612548 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
CIT-219ENST00000612548 FEZ1Q99689 392 aa17.03■□□□□ 0.32
CIT-219ENST00000612548 PHF20Q9BVI0 1012 aa17.03■□□□□ 0.32
CIT-219ENST00000612548 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
CIT-219ENST00000612548 BTBD18B2RXH4 712 aa17.02■□□□□ 0.32
CIT-219ENST00000612548 BMP3P12645 472 aa17.02■□□□□ 0.32
CIT-219ENST00000612548 PTMSP20962 102 aa17.02■□□□□ 0.32
CIT-219ENST00000612548 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
CIT-219ENST00000612548 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
CIT-219ENST00000612548 U2AF2P26368 475 aaKnown RBP eCLIP17.02■□□□□ 0.313e-6■■□□□ 13
CIT-219ENST00000612548 KRT2P35908 639 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 NLRP5P59047 1200 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 IKQ13123 557 aaPredicted RBP17.02■□□□□ 0.31
CIT-219ENST00000612548 NR5A1Q13285 461 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 PNMA8AQ86V59 439 aaPredicted RBP17.02■□□□□ 0.31
CIT-219ENST00000612548 OXER1Q8TDS5 423 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 FTOQ9C0B1 505 aaKnown RBP eCLIP17.02■□□□□ 0.31
CIT-219ENST00000612548 PICK1Q9NRD5 415 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 BARHL2Q9NY43 387 aa17.02■□□□□ 0.31
CIT-219ENST00000612548 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 STXBP3O00186 592 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 CEBPZQ03701 1054 aaKnown RBP17.01■□□□□ 0.31
CIT-219ENST00000612548 FAM83BQ5T0W9 1011 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 TMEM87AQ8NBN3 555 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 CDCA5Q96FF9 252 aa17.01■□□□□ 0.31
CIT-219ENST00000612548 ZNF396Q96N95 335 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms