RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RASA1P20936 1047 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 ELF2Q15723 593 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 SPTY2D1Q68D10 685 aaPredicted RBP16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 USP17L2Q6R6M4 530 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 KIF18AQ8NI77 898 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 DNAI1Q9UI46 699 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 PCP11498 1178 aaKnown RBP16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 GYS1P13807 737 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 ZNF444Q8N0Y2 327 aaPredicted RBP16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 TC2NQ8N9U0 490 aa16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 PDS5AQ29RF7 1337 aaKnown RBP16.01■□□□□ 0.15
PCDHGA3-202ENST00000612467 PPP1R3GB7ZBB8 358 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 SERPINB2P05120 415 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
PCDHGA3-202ENST00000612467 EIF6P56537 245 aaKnown RBP16■□□□□ 0.15
PCDHGA3-202ENST00000612467 E2F4Q16254 413 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
PCDHGA3-202ENST00000612467 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 EEF2KMTQ96G04 330 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
PCDHGA3-202ENST00000612467 GDAQ9Y2T3 454 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 APTXQ7Z2E3 356 aaKnown RBP16■□□□□ 0.15
PCDHGA3-202ENST00000612467 REXO1L1PQ8IX06 675 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 LRRC15Q8TF66 581 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 FERMT2Q96AC1 680 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 LEMD3Q9Y2U8 911 aa16■□□□□ 0.15
PCDHGA3-202ENST00000612467 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 PICALMQ13492 652 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 TEX11Q8IYF3 940 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 SEPT12Q8IYM1 358 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 KIF5BP33176 963 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 DDR1Q08345 913 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 PDXDC2PQ6P474 469 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 UBA5Q9GZZ9 404 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 PCDHA6Q9UN73 950 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 PCDHA8Q9Y5H6 950 aa15.99■□□□□ 0.15
PCDHGA3-202ENST00000612467 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 CDK8P49336 464 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 GRM4Q14833 912 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 RRAGBQ5VZM2 374 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 SPECC1LQ69YQ0 1117 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 KANK3Q6NY19 840 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 TRIM65Q6PJ69 517 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 ELOA2Q8IYF1 753 aaPredicted RBP15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 IRX2Q9BZI1 471 aaPredicted RBP15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 MAST2Q6P0Q8 1798 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 BAG3O95817 575 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 NR1I3Q14994 352 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 DGKHQ86XP1 1220 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 BAG1Q99933 345 aaPredicted RBP15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
PCDHGA3-202ENST00000612467 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 ERCC6LQ2NKX8 1250 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 TRIML1Q8N9V2 468 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 EYA3Q99504 573 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 FLT1P17948 1338 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 NOL10Q9BSC4 688 aaKnown RBP15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 KCND1Q9NSA2 647 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 PRDM4Q9UKN5 801 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 PPP2R2CQ9Y2T4 447 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 SNED1Q8TER0 1413 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 AFF2P51816 1311 aa15.97■□□□□ 0.15
PCDHGA3-202ENST00000612467 CCDC194A0A1B0GVG4 234 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 STXBP3O00186 592 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 GTF2IP78347 998 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 RBL2Q08999 1139 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 EPC1Q9H2F5 836 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 RHBDL3P58872 404 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 SPATA1Q5VX52 437 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 IQUBQ8NA54 791 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 WDR24Q96S15 920 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 VPS16Q9H269 839 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 THSD7AQ9UPZ6 1657 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 NAV1Q8NEY1 1877 aa15.96■□□□□ 0.15
PCDHGA3-202ENST00000612467 A0A1B0GTH6 734 aa15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 RNF225M0QZC1 329 aaPredicted RBP15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 M0R2N6 131 aa15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 TRIM37O94972 964 aa15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 KMT5BQ4FZB7 885 aa15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.14
PCDHGA3-202ENST00000612467 UIMC1Q96RL1 719 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms