RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CCDC50Q8IVM0 306 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 REXO1Q8N1G1 1221 aaKnown RBP12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 EXOC4Q96A65 974 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 SAP30BPQ9UHR5 308 aaKnown RBP12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
CDC42EP3-206ENST00000611976 PPFIA4O75335 1185 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 PHKA1P46020 1223 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 APBA1Q02410 837 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 BICD1Q96G01 975 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 SCLT1Q96NL6 688 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 RETREG2Q8NC44 543 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 USP17L21D6R901 530 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 CEP104O60308 925 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 NT5C3AQ9H0P0 336 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 GREM2Q9H772 168 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 BTG4Q9NY30 223 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 ERBB3P21860 1342 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 SMIM23A6NLE4 172 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 LAD1O00515 517 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 IGKV5-2P06315 115 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 TNFAIP3P21580 790 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 PSMB7Q99436 277 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 ATP6V0A2Q9Y487 856 aa12.12□□□□□ -0.47
CDC42EP3-206ENST00000611976 F8W031 263 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 ATP1A3P13637 1013 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 ACTN2P35609 894 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 UBL4BQ8N7F7 174 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 TSPOAP1O95153 1857 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 H7C1W4 665 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 MYL1P05976 194 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 GNGT1P63211 74 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 KLHL7Q8IXQ5 586 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 CAPS2Q9BXY5 557 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 KCNF1Q9H3M0 494 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 RWDD2AQ9UIY3 292 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 OR52Z1P0C646 297 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 ZNF658Q5TYW1 1059 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 DHX40Q8IX18 779 aaKnown RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 PAIP2Q9BPZ3 127 aaKnown RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 SEMA3EO15041 775 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 RNASE9P60153 205 aaKnown RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 CEP128Q6ZU80 1094 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
CDC42EP3-206ENST00000611976 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 ABCC12Q96J65 1359 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 DHTKD1Q96HY7 919 aaPredicted RBP12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 CABS1Q96KC9 395 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 FAM204AQ9H8W3 233 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 ADGRB1O14514 1584 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 BCAMP50895 628 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 CCDC25Q86WR0 208 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 MYOCDQ8IZQ8 938 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 PEX26Q7Z412 305 aa12.1□□□□□ -0.47
CDC42EP3-206ENST00000611976 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 PNMA1Q8ND90 353 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 RGS22Q8NE09 1264 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 VIMP08670 466 aaKnown RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 LACTBP83111 547 aaPredicted RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 CCDC6Q16204 474 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 INF2Q27J81 1249 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 LSM14BQ9BX40 385 aaKnown RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 KCNJ6P48051 423 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 TAOK1Q7L7X3 1001 aa12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
CDC42EP3-206ENST00000611976 RAB17Q9H0T7 212 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms