RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 NLGN1Q8N2Q7 840 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 ENAHQ8N8S7 591 aaPredicted RBP14.73□□□□□ -0.05
TCF3-220ENST00000611869 TRIML1Q8N9V2 468 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 BRIP1Q9BX63 1249 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 OVOS2A0A0G2JMS6 1433 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 KIF28PB7ZC32 967 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
TCF3-220ENST00000611869 CAMTA2O94983 1202 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 OR52Z1P0C646 297 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 ALX1Q15699 326 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 GTPBP4Q9BZE4 634 aaKnown RBP14.73□□□□□ -0.05
TCF3-220ENST00000611869 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 ARID5BQ14865 1188 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 NELFCDQ8IXH7 590 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 OXER1Q8TDS5 423 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 SLF1Q9BQI6 1058 aa14.73□□□□□ -0.05
TCF3-220ENST00000611869 PPEF1O14829 653 aaPredicted RBP14.72□□□□□ -0.05
TCF3-220ENST00000611869 CFBP00751 764 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 MCM3P25205 808 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 HS2ST1Q7LGA3 356 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 C2CD5Q86YS7 1000 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 CEP112Q8N8E3 955 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 SLC44A5Q8NCS7 719 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 DBNDD1Q9H9R9 158 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 DCP1AQ9NPI6 582 aaPredicted RBP14.72□□□□□ -0.05
TCF3-220ENST00000611869 SP4Q02446 784 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 UBN2Q6ZU65 1347 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 ABCC12Q96J65 1359 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 FMR1NBQ8N0W7 255 aaPredicted RBP14.72□□□□□ -0.05
TCF3-220ENST00000611869 SH3RF3Q8TEJ3 882 aaPredicted RBP14.72□□□□□ -0.05
TCF3-220ENST00000611869 CPVLQ9H3G5 476 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 ARHGEF10LQ9HCE6 1279 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 GTPBP6O43824 516 aaPredicted RBP14.72□□□□□ -0.05
TCF3-220ENST00000611869 MAN1B1Q9UKM7 699 aa14.72□□□□□ -0.05
TCF3-220ENST00000611869 U2AF2P26368 475 aaKnown RBP eCLIP14.71□□□□□ -0.057e-7■■□□□ 12.2
TCF3-220ENST00000611869 PPP1R2P41236 205 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 ANTXR2P58335 489 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 PPP2R3AQ06190 1150 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 MORC3Q14149 939 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 SPATA1Q5VX52 437 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 CYP26C1Q6V0L0 522 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 CPXCR1Q8N123 301 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 HAUS3Q68CZ6 603 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 NAP1L4Q99733 375 aaKnown RBP14.71□□□□□ -0.05
TCF3-220ENST00000611869 PSTPIP2Q9H939 334 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 SENP2Q9HC62 589 aa14.71□□□□□ -0.05
TCF3-220ENST00000611869 SRPRBQ9Y5M8 271 aaKnown RBP14.71□□□□□ -0.05
TCF3-220ENST00000611869 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
TCF3-220ENST00000611869 KCNJ18B7U540 433 aa14.71□□□□□ -0.06
TCF3-220ENST00000611869 RPN1P04843 607 aaKnown RBP14.71□□□□□ -0.06
TCF3-220ENST00000611869 GUCY1A2P33402 732 aa14.71□□□□□ -0.06
TCF3-220ENST00000611869 CKAP4Q07065 602 aaKnown RBP14.71□□□□□ -0.06
TCF3-220ENST00000611869 KCNJ12Q14500 433 aa14.71□□□□□ -0.06
TCF3-220ENST00000611869 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.06
TCF3-220ENST00000611869 PCDHA4Q9UN74 947 aa14.71□□□□□ -0.06
TCF3-220ENST00000611869 WDR19Q8NEZ3 1342 aa14.71□□□□□ -0.06
TCF3-220ENST00000611869 SLFN14P0C7P3 912 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 RAPGEF1Q13905 1077 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 TRIM14Q14142 442 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 CERKLQ49MI3 558 aaPredicted RBP14.7□□□□□ -0.06
TCF3-220ENST00000611869 TMTC1Q8IUR5 882 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 IKBKBO14920 756 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 CTDNEP1O95476 244 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 KRT13P13646 458 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 PPP4R3AQ6IN85 833 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 TMTC3Q6ZXV5 915 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 SGMS1Q86VZ5 419 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 BICD1Q96G01 975 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 PIGSQ96S52 555 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 ZNF215Q9UL58 517 aaPredicted RBP14.7□□□□□ -0.06
TCF3-220ENST00000611869 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 H0YHG0 523 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 GTF2F1P35269 517 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■■■□ 20.5
TCF3-220ENST00000611869 SLC16A2P36021 539 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 LONP1P36776 959 aaKnown RBP14.7□□□□□ -0.06
TCF3-220ENST00000611869 KRT27Q7Z3Y8 459 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 GSDMAQ96QA5 445 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 GLT8D2Q9H1C3 349 aa14.7□□□□□ -0.06
TCF3-220ENST00000611869 FAM207AQ9NSI2 230 aaPredicted RBP14.7□□□□□ -0.06
TCF3-220ENST00000611869 SAMSN1Q9NSI8 373 aaKnown RBP14.7□□□□□ -0.06
TCF3-220ENST00000611869 CASP1P29466 404 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 TRAPPC10P48553 1259 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 DLGAP5Q15398 846 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 CTR9Q6PD62 1173 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 SERPINB13Q9UIV8 391 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 GJA3Q9Y6H8 435 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 CASP7P55210 303 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 CCDC174Q6PII3 467 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 NAA15Q9BXJ9 866 aaKnown RBP14.69□□□□□ -0.06
TCF3-220ENST00000611869 TSPYL1Q9H0U9 437 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 PCDHA12Q9UN75 941 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 PTPREP23469 700 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 ICA1Q05084 483 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 GALNT17Q6IS24 598 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 COA7Q96BR5 231 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 SLC39A2Q9NP94 309 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 ZHX1Q9UKY1 873 aaPredicted RBP14.69□□□□□ -0.06
TCF3-220ENST00000611869 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
TCF3-220ENST00000611869 DDX39AO00148 427 aaKnown RBP14.69□□□□□ -0.06
TCF3-220ENST00000611869 FDPSP14324 419 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms