RNA–Protein interactions for RNA: ENST00000611255.4

LRMDA-215, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-215ENST00000611255 SAMD1Q6SPF0 538 aaPredicted RBP27.18■■□□□ 1.94
LRMDA-215ENST00000611255 BADQ92934 168 aa27.18■■□□□ 1.94
LRMDA-215ENST00000611255 FERMT2Q96AC1 680 aa27.18■■□□□ 1.94
LRMDA-215ENST00000611255 PRDM5Q9NQX1 630 aaPredicted RBP27.18■■□□□ 1.94
LRMDA-215ENST00000611255 PDLIM7Q9NR12 457 aa27.18■■□□□ 1.94
LRMDA-215ENST00000611255 SLC25A27O95847 323 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 CHGBP05060 677 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 ZNF697Q5TEC3 545 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 C1orf53Q5VUE5 145 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 SH3RF1Q7Z6J0 888 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 BCL11AQ9H165 835 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 BOLA2Q9H3K6 86 aa27.17■■□□□ 1.94
LRMDA-215ENST00000611255 COL11A1P12107 1806 aaPredicted RBP27.16■■□□□ 1.94
LRMDA-215ENST00000611255 TRIM43BA6NCK2 446 aa27.16■■□□□ 1.94
LRMDA-215ENST00000611255 USP17L12C9JPN9 530 aa27.16■■□□□ 1.94
LRMDA-215ENST00000611255 USP17L21D6R901 530 aa27.16■■□□□ 1.94
LRMDA-215ENST00000611255 C16orf86Q6ZW13 317 aa27.16■■□□□ 1.94
LRMDA-215ENST00000611255 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.16■■□□□ 1.94
LRMDA-215ENST00000611255 TRIM43Q96BQ3 446 aaPredicted RBP27.16■■□□□ 1.94
LRMDA-215ENST00000611255 COL25A1Q9BXS0 654 aaPredicted RBP27.16■■□□□ 1.94
LRMDA-215ENST00000611255 FBXO28Q9NVF7 368 aa27.16■■□□□ 1.94
LRMDA-215ENST00000611255 EYSQ5T1H1 3165 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 RAB11FIP3O75154 756 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 HMMRO75330 724 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 EEF2P13639 858 aaKnown RBP27.15■■□□□ 1.94
LRMDA-215ENST00000611255 ATP5JP18859 108 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 RIOX2Q8IUF8 465 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 MMP19Q99542 508 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 NRBP1Q9UHY1 535 aa27.15■■□□□ 1.94
LRMDA-215ENST00000611255 PGK2P07205 417 aa27.14■■□□□ 1.94
LRMDA-215ENST00000611255 ZBTB40Q9NUA8 1239 aa27.14■■□□□ 1.94
LRMDA-215ENST00000611255 PHF24Q9UPV7 400 aa27.14■■□□□ 1.94
LRMDA-215ENST00000611255 TLE2Q04725 743 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 ZNF792Q3KQV3 632 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 CDX2Q99626 313 aaPredicted RBP27.13■■□□□ 1.93
LRMDA-215ENST00000611255 HAUS7Q99871 368 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 TINF2Q9BSI4 451 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.13■■□□□ 1.93
LRMDA-215ENST00000611255 SEMA6BQ9H3T3 888 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 KANSL2Q9H9L4 492 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 XPNPEP3Q9NQH7 507 aa27.13■■□□□ 1.93
LRMDA-215ENST00000611255 VWA5AO00534 786 aa27.12■■□□□ 1.93
LRMDA-215ENST00000611255 TAL1P17542 331 aaPredicted RBP27.12■■□□□ 1.93
LRMDA-215ENST00000611255 STAT3P40763 770 aa27.12■■□□□ 1.93
LRMDA-215ENST00000611255 UBE3CQ15386 1083 aa27.12■■□□□ 1.93
LRMDA-215ENST00000611255 REPS2Q8NFH8 660 aa27.12■■□□□ 1.93
LRMDA-215ENST00000611255 PPP1R9AQ9ULJ8 1098 aa27.12■■□□□ 1.93
LRMDA-215ENST00000611255 DIS3Q9Y2L1 958 aaKnown RBP27.12■■□□□ 1.93
LRMDA-215ENST00000611255 ZBED9Q6R2W3 1325 aa27.12■■□□□ 1.93
LRMDA-215ENST00000611255 RARBP10826 455 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 MS4A1P11836 297 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 ITGB8P26012 769 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 CTR9Q6PD62 1173 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 AMOTL1Q8IY63 956 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 ZNF214Q9UL59 606 aaPredicted RBP27.11■■□□□ 1.93
LRMDA-215ENST00000611255 VCANP13611 3396 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 CDH23Q9H251 3354 aa27.11■■□□□ 1.93
LRMDA-215ENST00000611255 PLXNA1Q9UIW2 1896 aa27.1■■□□□ 1.93
LRMDA-215ENST00000611255 PGK1P00558 417 aa27.1■■□□□ 1.93
LRMDA-215ENST00000611255 ZNF865P0CJ78 1059 aaPredicted RBP27.1■■□□□ 1.93
LRMDA-215ENST00000611255 SMAD3P84022 425 aaKnown RBP27.1■■□□□ 1.93
LRMDA-215ENST00000611255 KCTD2Q14681 263 aa27.1■■□□□ 1.93
LRMDA-215ENST00000611255 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.1■■□□□ 1.93
LRMDA-215ENST00000611255 COG6Q9Y2V7 657 aa27.1■■□□□ 1.93
LRMDA-215ENST00000611255 TACC3Q9Y6A5 838 aa27.1■■□□□ 1.93
LRMDA-215ENST00000611255 SLC4A4Q9Y6R1 1079 aa27.1■■□□□ 1.93
LRMDA-215ENST00000611255 FAM83BQ5T0W9 1011 aa27.09■■□□□ 1.93
LRMDA-215ENST00000611255 RNF180Q86T96 592 aa27.09■■□□□ 1.93
LRMDA-215ENST00000611255 PUS7LQ9H0K6 701 aaKnown RBP27.09■■□□□ 1.93
LRMDA-215ENST00000611255 GOPCQ9HD26 462 aa27.09■■□□□ 1.93
LRMDA-215ENST00000611255 DDX19BQ9UMR2 479 aa27.09■■□□□ 1.93
LRMDA-215ENST00000611255 MYH7P12883 1935 aa27.08■■□□□ 1.93
LRMDA-215ENST00000611255 DDRGK1Q96HY6 314 aa27.08■■□□□ 1.93
LRMDA-215ENST00000611255 TTYH1Q9H313 450 aaPredicted RBP27.08■■□□□ 1.93
LRMDA-215ENST00000611255 ROBO3Q96MS0 1386 aa27.08■■□□□ 1.93
LRMDA-215ENST00000611255 PRUNE2Q8WUY3 3088 aa27.08■■□□□ 1.92
LRMDA-215ENST00000611255 CLTBP09497 229 aa27.07■■□□□ 1.92
LRMDA-215ENST00000611255 MIER1Q8N108 512 aa27.07■■□□□ 1.92
LRMDA-215ENST00000611255 A0A1W2PQ45 241 aaPredicted RBP27.06■■□□□ 1.92
LRMDA-215ENST00000611255 A0A1W2PQY0 241 aa27.06■■□□□ 1.92
LRMDA-215ENST00000611255 KIAA0355O15063 1070 aa27.06■■□□□ 1.92
LRMDA-215ENST00000611255 RAD21O60216 631 aa27.06■■□□□ 1.92
LRMDA-215ENST00000611255 COPB2P35606 906 aa27.06■■□□□ 1.92
LRMDA-215ENST00000611255 EPHB4P54760 987 aa27.06■■□□□ 1.92
LRMDA-215ENST00000611255 LENG1Q96BZ8 264 aaPredicted RBP27.06■■□□□ 1.92
LRMDA-215ENST00000611255 ADAMTS4O75173 837 aa27.05■■□□□ 1.92
LRMDA-215ENST00000611255 AKR1A1P14550 325 aa27.05■■□□□ 1.92
LRMDA-215ENST00000611255 GREB1LQ9C091 1923 aaPredicted RBP27.05■■□□□ 1.92
LRMDA-215ENST00000611255 ZSCAN25Q6NSZ9 544 aa27.04■■□□□ 1.92
LRMDA-215ENST00000611255 MAFAQ8NHW3 353 aaPredicted RBP27.04■■□□□ 1.92
LRMDA-215ENST00000611255 MYLIPQ8WY64 445 aa27.04■■□□□ 1.92
LRMDA-215ENST00000611255 NUP88Q99567 741 aaPredicted RBP27.04■■□□□ 1.92
LRMDA-215ENST00000611255 SPTBN5Q9NRC6 3674 aaKnown RBP27.03■■□□□ 1.92
LRMDA-215ENST00000611255 PQBP1O60828 265 aaKnown RBP27.03■■□□□ 1.92
LRMDA-215ENST00000611255 RASA1P20936 1047 aa27.03■■□□□ 1.92
LRMDA-215ENST00000611255 SBK1Q52WX2 424 aa27.03■■□□□ 1.92
LRMDA-215ENST00000611255 STRBPQ96SI9 672 aaKnown RBP27.03■■□□□ 1.92
LRMDA-215ENST00000611255 SLF1Q9BQI6 1058 aa27.03■■□□□ 1.92
LRMDA-215ENST00000611255 TSEN34Q9BSV6 310 aaKnown RBP27.03■■□□□ 1.92
LRMDA-215ENST00000611255 ARPP21Q9UBL0 812 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms